RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 ZSCAN5CA6NGD5 496 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 TXNP10599 105 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 NDUFV1P49821 464 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MARSP56192 900 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 CTSWP56202 376 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ZNF658Q5TYW1 1059 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 CHSY1Q86X52 802 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CCDC197Q8NCU1 140 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NKD1Q969G9 470 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 DIS3Q9Y2L1 958 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SMIM31A0A1B0GVY4 71 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SLC9A3R1O14745 358 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SP100P23497 879 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 PRELPP51888 382 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 GEMIN4P57678 1058 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 IFT88Q13099 833 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ZNF790Q6PG37 636 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 P3H2Q8IVL5 708 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ADSSL1Q8N142 457 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KCNB2Q92953 911 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 RMND5BQ96G75 393 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 PCDHGB5Q9Y5G0 923 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PHF20L1A8MW92 1017 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CTIFO43310 598 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 MTA2O94776 668 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NR2F2P24468 414 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 FEN1P39748 380 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ABL2P42684 1182 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CTCFP49711 727 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 LRRC69Q6ZNQ3 347 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 OR8K1Q8NGG5 319 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SCFD2Q8WU76 684 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 KLHL29Q96CT2 875 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PRMT6Q96LA8 375 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SERPINB12Q96P63 405 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 BHMT2Q9H2M3 363 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 VAV3Q9UKW4 847 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MAPK13O15264 365 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CLEC3AO75596 197 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SEC31AO94979 1220 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 GUCY2CP25092 1073 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CBX3Q13185 183 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PAN2Q504Q3 1202 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 NAA35Q5VZE5 725 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CCDC149Q6ZUS6 474 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ANGPT2O15123 496 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 STX7O15400 261 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 MAGEB3O15480 346 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 SLC2A3P11169 496 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CYP2A6P11509 494 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 PABPC1P11940 636 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ACADSBP45954 432 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PEX3P56589 373 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CSTF3Q12996 717 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SYCP2LQ5T4T6 812 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 PRUNE1Q86TP1 453 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 STX12Q86Y82 276 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ATPAF2Q8N5M1 289 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 HIPK4Q8NE63 616 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 TMX3Q96JJ7 454 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CDH7Q9ULB5 785 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 URB2Q14146 1524 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 CENPXA8MT69 81 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 TMCC2O75069 709 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MFN2O95140 757 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NT5C2P49902 561 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 ATP12AP54707 1039 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 NUP107P57740 925 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 FAM171BQ6P995 826 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MAGEC3Q8TD91 643 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 MAML1Q92585 1016 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CDK5RAP1Q96SZ6 601 aaKnown RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 SIKE1Q9BRV8 207 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CLEC4MQ9H2X3 399 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 HMX1Q9NP08 348 aaPredicted RBP3.53□□□□□ -1.84
NEB-204ENST00000409198 ARHGEF38Q9NXL2 777 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 DNAJC5BQ9UF47 199 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 CDC42BPGQ6DT37 1551 aa3.53□□□□□ -1.84
NEB-204ENST00000409198 VEGFAP15692 232 aaPredicted RBP3.53□□□□□ -1.85
NEB-204ENST00000409198 KCNQ4P56696 695 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 GPSM2P81274 684 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 KRR1Q13601 381 aaKnown RBP3.53□□□□□ -1.85
NEB-204ENST00000409198 GRAMD1BQ3KR37 738 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 UNC45BQ8IWX7 931 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 CHPFQ8IZ52 775 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 MPP5Q8N3R9 675 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 HIST1H2AAQ96QV6 131 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 EXOSC4Q9NPD3 245 aaKnown RBP3.53□□□□□ -1.85
NEB-204ENST00000409198 WWOXQ9NZC7 414 aa3.53□□□□□ -1.85
NEB-204ENST00000409198 ARIH1Q9Y4X5 557 aaPredicted RBP3.53□□□□□ -1.85
NEB-204ENST00000409198 USP27XA6NNY8 438 aa3.52□□□□□ -1.85
NEB-204ENST00000409198 KERAO60938 352 aa3.52□□□□□ -1.85
NEB-204ENST00000409198 WARSP23381 471 aaKnown RBP3.52□□□□□ -1.85
NEB-204ENST00000409198 MORC3Q14149 939 aa3.52□□□□□ -1.85
NEB-204ENST00000409198 DGKDQ16760 1214 aa3.52□□□□□ -1.85
NEB-204ENST00000409198 PLA2G4FQ68DD2 849 aa3.52□□□□□ -1.85
NEB-204ENST00000409198 CARNMT1Q8N4J0 409 aa3.52□□□□□ -1.85
NEB-204ENST00000409198 ZNF280CQ8ND82 737 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms