RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 C6orf203Q9P0P8 240 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 TRIM49BA6NDI0 452 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 SERPINB8P50452 374 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 SLC9A5Q14940 896 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 DDR2Q16832 855 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 LONRF1Q17RB8 773 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 TTLL9Q3SXZ7 439 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 PCNX4Q63HM2 1172 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 CHMP1BQ7LBR1 199 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 MOSPD2Q8NHP6 518 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 DPYSL4O14531 572 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 NCK2O43639 380 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 IL18RAPO95256 599 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 HIST2H2ACQ16777 129 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 HIST2H2AA3Q6FI13 130 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 MCRS1Q96EZ8 462 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 LIMA1Q9UHB6 759 aaKnown RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 CYBBP04839 570 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 SNX17Q15036 470 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 C1orf50Q9BV19 199 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 CACNA2D2Q9NY47 1150 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 AGO2Q9UKV8 859 aaKnown RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 PCDHA6Q9UN73 950 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 PCDHA8Q9Y5H6 950 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 SPACA6W5XKT8 324 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 DYTNA2CJ06 578 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 SDE2Q6IQ49 451 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 PMF1Q6P1K2 205 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 NSUN6Q8TEA1 469 aaKnown RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 LXNQ9BS40 222 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 POLR3FQ9H1D9 316 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 TIMM44O43615 452 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 CDC25AP30304 524 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 TEX28O15482 410 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 ZNF862O60290 1169 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 ECDO95905 644 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 EIF2B2P49770 351 aaKnown RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 ENKURQ8TC29 256 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 MARCOQ9UEW3 520 aaPredicted RBP12.64□□□□□ -0.39
SHANK2-203ENST00000409161 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
SHANK2-203ENST00000409161 USP17L3A6NCW0 530 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 USP17L4A6NCW7 530 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 P4HBP07237 508 aaKnown RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 SLC16A2P36021 539 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 EDRF1Q3B7T1 1238 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 USP17L1Q7RTZ2 530 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ZNF333Q96JL9 665 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ARIH1Q9Y4X5 557 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 WARSP23381 471 aaKnown RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 HOXA13P31271 388 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 PTPN21Q16825 1174 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 MDH1BQ5I0G3 518 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 UNC45BQ8IWX7 931 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 RXFP1Q9HBX9 757 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 POTEMA6NI47 508 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 MAGEA4P43358 317 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ARMC7Q9H6L4 198 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 UBE2SQ16763 222 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 TIMM50Q3ZCQ8 353 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 BNC2Q6ZN30 1099 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 MMGT1Q8N4V1 131 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 RAD54BQ9Y620 910 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 TTKP33981 857 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 SCTRP47872 440 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 CYP51A1Q16850 503 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 AHI1Q8N157 1196 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 UBE2OQ9C0C9 1292 aaKnown RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ZNF23P17027 643 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 AKT1P31749 480 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 GRM4Q14833 912 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ANKMY2Q8IV38 441 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 CENPLQ8N0S6 344 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 SETD9Q8NE22 299 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ANKRD49Q8WVL7 239 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 RGS18Q9NS28 235 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 BSDC1Q9NW68 430 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 P4HA2O15460 535 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 CHI3L2Q15782 390 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 ARHGAP22Q7Z5H3 698 aa12.63□□□□□ -0.39
SHANK2-203ENST00000409161 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
SHANK2-203ENST00000409161 A0A087WWV3 80 aa12.62□□□□□ -0.39
SHANK2-203ENST00000409161 KIZQ2M2Z5 673 aa12.62□□□□□ -0.39
SHANK2-203ENST00000409161 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
SHANK2-203ENST00000409161 TSEN34Q9BSV6 310 aaKnown RBP12.62□□□□□ -0.39
SHANK2-203ENST00000409161 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
SHANK2-203ENST00000409161 ZNF394Q53GI3 561 aa12.62□□□□□ -0.39
SHANK2-203ENST00000409161 ZNF341Q9BYN7 854 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms