RNA–Protein interactions for RNA: ENST00000406524.6

CCDC178-205, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 3,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-205ENST00000406524 SKIDA1Q1XH10 827 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 KLHL38Q2WGJ6 581 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 C2orf27AQ580R0 203 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 TRAPPC3LQ5T215 181 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 NDUFAF5Q5TEU4 345 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 SHEQ5VZ18 495 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 ATL3Q6DD88 541 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 PRPF40BQ6NWY9 871 aaKnown RBP3.98□□□□□ -1.77
CCDC178-205ENST00000406524 ZNF783Q6ZMS7 281 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 SNX31Q8N9S9 440 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 OR52K1Q8NGK4 314 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 CAGE1Q8TC20 777 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 GANCQ8TET4 914 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 TMEM40Q8WWA1 233 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 SMG7Q92540 1137 aaKnown RBP3.98□□□□□ -1.77
CCDC178-205ENST00000406524 USP13Q92995 863 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-205ENST00000406524 METTL2AQ96IZ6 378 aaKnown RBP3.98□□□□□ -1.77
CCDC178-205ENST00000406524 TMEM68Q96MH6 324 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 ZDHHC15Q96MV8 337 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 EYA3Q99504 573 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 WACQ9BTA9 647 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 NUP85Q9BW27 656 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 CINPQ9BW66 212 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-205ENST00000406524 APOL6Q9BWW8 343 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 PRKD2Q9BZL6 878 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 SHCBP1LQ9BZQ2 653 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 NIF3L1Q9GZT8 377 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 NINJ2Q9NZG7 142 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 PSME2Q9UL46 239 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 TMCO1Q9UM00 188 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 DNM3Q9UQ16 869 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 ZNF148Q9UQR1 794 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 POLHQ9Y253 713 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 PIAS3Q9Y6X2 628 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 ZHX2Q9Y6X8 837 aa3.98□□□□□ -1.77
CCDC178-205ENST00000406524 ZNF804BA4D1E1 1349 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 MACROD2A1Z1Q3 448 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PMS2P1A4D2B8 440 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ZSCAN5BA6NJL1 495 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 GSG1L2A8MUP6 293 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 J3QW42 95 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SOCS7O14512 581 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 FPGTO14772 594 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 TPP1O14773 563 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SSX5O60225 188 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SLITRK3O94933 977 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 TRIM16O95361 564 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 IFNA14P01570 189 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 KRT7P08729 469 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SNRPAP09012 282 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 LINGO3P0C6S8 592 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PRR35P0CG20 571 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ZBTB48P10074 688 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 KRT4P19013 534 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 POLR2EP19388 210 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ALDH1A3P47895 512 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 CD97P48960 835 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 RNF144AP50876 292 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 METAP1P53582 386 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 AMPD2Q01433 879 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PPIL2Q13356 520 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 RAPSNQ13702 412 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ERV3-1Q14264 604 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PCBP2Q15366 365 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PFKFB3Q16875 520 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ARL13BQ3SXY8 428 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 CAVIN1Q6NZI2 390 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ERICH5Q6P6B1 374 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 R3HCC1LQ7Z5L2 792 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SLC51BQ86UW2 128 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 NKAIN4Q8IVV8 208 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SULF1Q8IWU6 871 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 REXO1L1PQ8IX06 675 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 CCAR2Q8N163 923 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SH3RF3Q8TEJ3 882 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 LZICQ8WZA0 190 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 EDC3Q96F86 508 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 EXOC2Q96KP1 924 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 NSMCE3Q96MG7 304 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 MLPHQ9BV36 600 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SPZ1Q9BXG8 430 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 DENND2DQ9H6A0 471 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PIDD1Q9HB75 910 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 EPB41L5Q9HCM4 733 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 POLR3BQ9NW08 1133 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ABI2Q9NYB9 513 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 CORO1CQ9ULV4 474 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 CHMP2BQ9UQN3 213 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 MINDY4BA8MYZ0 360 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 DDX39AO00148 427 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 SMAD9O15198 467 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 MEFVO15553 781 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 ERAL1O75616 437 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PTBP3O95758 552 aaKnown RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PLGP00747 810 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 PENKP01210 267 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 QDPRP09417 244 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 HOXA11P31270 313 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-205ENST00000406524 CTNNB1P35222 781 aa3.97□□□□□ -1.77
CCDC178-205ENST00000406524 RFC1P35251 1148 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms