RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 ADAMTS5Q9UNA0 930 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 C15orf41Q9Y2V0 281 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 SPAG7O75391 227 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 ASS1P00966 412 aaKnown RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 EIF4BP23588 611 aaKnown RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 CDH5P33151 784 aaPredicted RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 PHBP35232 272 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 SLC8A3P57103 927 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF252P-AS1Q0IIN9 211 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 FAM47EQ6ZV65 393 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 WDR49Q8IV35 697 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 ZBED8Q8IZ13 594 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 KIF2BQ8N4N8 673 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 LRRC8CQ8TDW0 803 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 LRRC37BQ96QE4 947 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 NIFKQ9BYG3 293 aaKnown RBP11.32□□□□□ -0.6
CLIP4-204ENST00000404424 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 CYP39A1Q9NYL5 469 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 L3MBTL1Q9Y468 752 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 SIP14410 1827 aa11.32□□□□□ -0.6
CLIP4-204ENST00000404424 F8VP50 259 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 SMAPO00193 183 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 EDF1O60869 148 aaKnown RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ZSCAN5DPP0CG00 497 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 TCF4P15884 667 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ATP4AP20648 1035 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ICAM3P32942 547 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 CDKN2BP42772 138 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 TGFB2P61812 414 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 DNAJC3Q13217 504 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 CRYMQ14894 314 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 WDR72Q3MJ13 1102 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ACCSLQ4AC99 568 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 EFHC2Q5JST6 749 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 CIAPIN1Q6FI81 312 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 TTC13Q8NBP0 860 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 SLC35B2Q8TB61 432 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 INPP5DQ92835 1189 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ACAD9Q9H845 621 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 STRIP2Q9ULQ0 834 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 STK38LQ9Y2H1 464 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 CEP83Q9Y592 693 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 MYH9P35579 1960 aaKnown RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 TYROBPO43914 113 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 ZWINTO95229 277 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 CA4P22748 312 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 RFC5P40937 340 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 GEMIN4P57678 1058 aaKnown RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PDE4CQ08493 712 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 MYO1EQ12965 1108 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PDIA2Q13087 525 aaKnown RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 FASTKD3Q14CZ7 662 aaKnown RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 AGGF1Q8N302 714 aaeCLIP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 MAB21L3Q8N8X9 362 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 NSMCE1Q8WV22 266 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
CLIP4-204ENST00000404424 C12orf42Q96LP6 360 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 TMEM237Q96Q45 408 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 MYLK2Q9H1R3 596 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 LRMDAQ9H2I8 198 aa11.31□□□□□ -0.6
CLIP4-204ENST00000404424 LRRD1A4D1F6 860 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 SGK1O00141 431 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 KIF1CO43896 1103 aaKnown RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ADCY3O60266 1144 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ETS1P14921 441 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 IBSPP21815 317 aaPredicted RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 KCNA4P22459 653 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 RPA3P35244 121 aaPredicted RBP11.3□□□□□ -0.6
CLIP4-204ENST00000404424 RASSF2P50749 326 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 SURF1Q15526 300 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 HIF1AQ16665 826 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 SGSM1Q2NKQ1 1148 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 HHATQ5VTY9 493 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ERICH1Q86X53 443 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 PPIL6Q8IXY8 311 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ZNF398Q8TD17 642 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ERP27Q96DN0 273 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 BATF3Q9NR55 127 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 CHKBQ9Y259 395 aa11.3□□□□□ -0.6
CLIP4-204ENST00000404424 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms