RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 LRRC19Q9H756 370 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 STRIP2Q9ULQ0 834 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 GABRQQ9UN88 632 aa13□□□□□ -0.33
CLIP4-203ENST00000401617 WDR3Q9UNX4 943 aaKnown RBP eCLIP13□□□□□ -0.33
CLIP4-203ENST00000401617 UTP11Q9Y3A2 253 aaKnown RBP13□□□□□ -0.33
CLIP4-203ENST00000401617 O00370 1275 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 RECQL4O94761 1208 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 HMGCRP04035 888 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 KCNE1P15382 129 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 GABRB2P47870 512 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 FNTAP49354 379 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 MYO1EQ12965 1108 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 TERF2Q15554 542 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 LRRC38Q5VT99 294 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 MFSD14CQ5VZR4 134 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 TAF2Q6P1X5 1199 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 DNAJC24Q6P3W2 148 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLIP4-203ENST00000401617 C7orf31Q8N865 590 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 BEST2Q8NFU1 509 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 MAIP1Q8WWC4 291 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 SLCO2A1Q92959 643 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 MAGOHBQ96A72 148 aaKnown RBP12.99□□□□□ -0.33
CLIP4-203ENST00000401617 SH3GL2Q99962 352 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 NEUROG2Q9H2A3 272 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 HES2Q9Y543 173 aa12.99□□□□□ -0.33
CLIP4-203ENST00000401617 SIGLEC16A6NMB1 481 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 DAPK3O43293 454 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 MICAL2O94851 1124 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 ALDH1A1P00352 501 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 C6orf222P0C671 652 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 COILP38432 576 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 GGCXP38435 758 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 NDST1P52848 882 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 OGDHQ02218 1023 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 JAMLQ86YT9 394 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 EXD1Q8NHP7 514 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 C18orf8Q96DM3 657 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 TRIM51Q9BSJ1 452 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 WDR35Q9P2L0 1181 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 GOLGA6BA6NDN3 693 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 PODXLO00592 558 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 PPEF2O14830 753 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 GPD2P43304 727 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 KLF1Q13351 362 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 PIGHQ14442 188 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 ZNF268Q14587 947 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 GNASQ5JWF2 1037 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 DAB2IPQ5VWQ8 1189 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 C9orf57Q5W0N0 161 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 LCLAT1Q6UWP7 414 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 FNIP1Q8TF40 1166 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 MCEEQ96PE7 176 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 CPXM1Q96SM3 734 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 HERPUD2Q9BSE4 406 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 TUBGCP4Q9UGJ1 667 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 GTF2IRD1Q9UHL9 959 aa12.98□□□□□ -0.33
CLIP4-203ENST00000401617 UBQLN1Q9UMX0 589 aaKnown RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 PIN4Q9Y237 131 aaKnown RBP12.98□□□□□ -0.33
CLIP4-203ENST00000401617 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 PIRO00625 290 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 POLR3GO15318 223 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 SEPT4O43236 478 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 CYP3A5P20815 502 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 FLT3LGP49771 235 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 ORC1Q13415 861 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 HSP90B2PQ58FF3 399 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 CCDC137Q6PK04 289 aaKnown RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 LIMS2Q7Z4I7 341 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 XYLT1Q86Y38 959 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 PIK3R5Q8WYR1 880 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 C18orf25Q96B23 403 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 MCRS1Q96EZ8 462 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 HEXIM2Q96MH2 286 aaKnown RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 NT5C1AQ9BXI3 368 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 TRIM6Q9C030 488 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 ZDHHC18Q9NUE0 388 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 MRPS6P82932 125 aaKnown RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 STILQ15468 1287 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 CYP4A22Q5TCH4 519 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 DCUN1D2Q6PH85 259 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 RPAINQ86UA6 219 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 FAM228AQ86W67 206 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
CLIP4-203ENST00000401617 TJP2Q9UDY2 1190 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 RASAL2Q9UJF2 1139 aa12.97□□□□□ -0.33
CLIP4-203ENST00000401617 F8VP50 259 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 ADAMTS4O75173 837 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 CD4P01730 458 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 ERBB2P04626 1255 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 AKAP5P24588 427 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 PTPN7P35236 360 aa12.96□□□□□ -0.33
CLIP4-203ENST00000401617 PSMC1P62191 440 aaKnown RBP12.96□□□□□ -0.33
CLIP4-203ENST00000401617 PKDCCQ504Y2 493 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms