RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 DHX38Q92620 1227 aaKnown RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RNF25Q96BH1 459 aaPredicted RBP16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MFSD14AQ96MC6 490 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NLRP4Q96MN2 994 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PLVAPQ9BX97 442 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CAPN7Q9Y6W3 813 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ADGRA3Q8IWK6 1321 aa16.92■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ATMINO43313 823 aaPredicted RBP16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SHBGP04278 402 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 EFNA5P52803 228 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 IFT88Q13099 833 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TRIM71Q2Q1W2 868 aaKnown RBP16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C6orf118Q5T5N4 469 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ENOSF1Q7L5Y1 443 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZDHHC14Q8IZN3 488 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CCDC127Q96BQ5 260 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FAM81BQ96LP2 452 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FBXL18Q96ME1 805 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 STMN4Q9H169 189 aaPredicted RBP16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 C2orf40Q9H1Z8 148 aa16.91■□□□□ 0.3
CHRFAM7A-203ENST00000401522 A0A087WZ62 844 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 AGTP01019 485 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TMEM62Q0P6H9 643 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 KIZQ2M2Z5 673 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ACAD10Q6JQN1 1059 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CCDC121Q6ZUS5 278 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CCDC105Q8IYK2 499 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 NLRP7Q8WX94 980 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ART4Q93070 314 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TATDN2Q93075 761 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SAAL1Q96ER3 474 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 XPO6Q96QU8 1125 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 FDXACB1Q9BRP7 624 aaPredicted RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TMEM134Q9H6X4 195 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ACTR5Q9H9F9 607 aaPredicted RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RAB20Q9NX57 234 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DENND3A2RUS2 1198 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ZC3H11AO75152 810 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RARAP10276 462 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 RARGP13631 454 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 THPOP40225 353 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 PHKA2P46019 1235 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 MRPS6P82932 125 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TLE2Q04725 743 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CYP24A1Q07973 514 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ACTN3Q08043 901 aaPredicted RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SIX1Q15475 284 aaPredicted RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 TRIM60Q495X7 471 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ERMARDQ5T6L9 678 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 ICE2Q659A1 982 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 CACNA2D3Q8IZS8 1091 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 DDX1Q92499 740 aaKnown RBP16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 P3H4Q92791 437 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SLCO2A1Q92959 643 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 SEC16BQ96JE7 1060 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 LRRC19Q9H756 370 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 LRRC4CQ9HCJ2 640 aa16.9■□□□□ 0.3
CHRFAM7A-203ENST00000401522 H0YHG0 523 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 K7ERI5 159 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 ECEL1O95672 775 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 MMP13P45452 471 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CRYBB1P53674 252 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 FAAP100Q0VG06 881 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 SLC29A2Q14542 456 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 LRRC26Q2I0M4 334 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 FAM26DQ5JW98 314 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 GKAP1Q5VSY0 366 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 ZBTB8OSQ8IWT0 167 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 TAS1R2Q8TE23 839 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 ZNF668Q96K58 619 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CDHR5Q9HBB8 845 aa16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CHORDC1Q9UHD1 332 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-203ENST00000401522 M0QZ92 97 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CHRNA1P02708 482 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 DRD4P21917 467 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 GCNT1Q02742 428 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 MGAT3Q09327 533 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 QPCTQ16769 361 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 TAS1R3Q7RTX0 852 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 MAIP1Q8WWC4 291 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CHMP6Q96FZ7 201 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 BTBD6Q96KE9 485 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 PPP1R16BQ96T49 567 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 GCOM2Q9BZD3 368 aaPredicted RBP16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 FZD8Q9H461 694 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 ACP6Q9NPH0 428 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 TCRBV7S2A1N4TA0A589 114 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 FSCN2O14926 492 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 CKBP12277 381 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 GARTP22102 1010 aa16.88■□□□□ 0.29
CHRFAM7A-203ENST00000401522 EIF4BP23588 611 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms