RNA–Protein interactions for RNA: ENST00000401088.8

SZRD1-201, Transcript of SUZ RNA binding domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SZRD1, Length 3,636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SZRD1-201ENST00000401088 TMEM110Q86TL2 294 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 NUDCD3Q8IVD9 361 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
SZRD1-201ENST00000401088 INPP5FQ9Y2H2 1132 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L15C9J2P7 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L13C9JLJ4 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L11C9JVI0 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L18D6R9N7 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L22D6RA61 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 TM9SF1O15321 606 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 BANF1O75531 89 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 SLC16A2P36021 539 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 RAP1GDS1P52306 607 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 IGBP1P78318 339 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 CTC1Q2NKJ3 1217 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 RHBDF2Q6PJF5 856 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 FBXO27Q8NI29 283 aa12.89□□□□□ -0.35
SZRD1-201ENST00000401088 NAP1L4Q99733 375 aaKnown RBP12.89□□□□□ -0.35
SZRD1-201ENST00000401088 PRR5-ARHGAP8B1AHC4 643 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 IPO5O00410 1097 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 TBC1D12O60347 775 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 ABHD2P08910 425 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 GRIA2P42262 883 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 EIF2B2P49770 351 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 ARHGAP8P85298 464 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 DUS1LQ6P1R4 473 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CAAP1Q9H8G2 361 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 GTF3C4Q9UKN8 822 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 HBS1LQ9Y450 684 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 P4HA2O15460 535 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 PROCP04070 461 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 LDHBP07195 334 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 OCM2P0CE71 109 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 OCMP0CE72 109 aaPredicted RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 POLD1P28340 1107 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 DYNLT1P63172 113 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 COG2Q14746 738 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 TREML1Q86YW5 311 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CROCCP3Q8IVE0 287 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 ZFP28Q8NHY6 868 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 LIN28AQ9H9Z2 209 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 GPAMQ9HCL2 828 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 HSFX1Q9UBD0 423 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 AGTPBP1Q9UPW5 1226 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 NOP56O00567 594 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CFLARO15519 480 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 FGRP09769 529 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 FAM58BPP0C7Q3 252 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 SLC1A1P43005 524 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CENPCQ03188 943 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 PTK7Q13308 1070 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CHI3L2Q15782 390 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 SUSD4Q5VX71 490 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 PDIK1LQ8N165 341 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
SZRD1-201ENST00000401088 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
SZRD1-201ENST00000401088 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 H3BSA7 217 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
SZRD1-201ENST00000401088 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
SZRD1-201ENST00000401088 FDFT1P37268 417 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 NSFP46459 744 aaKnown RBP12.87□□□□□ -0.35
SZRD1-201ENST00000401088 MXI1P50539 228 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 STAT2P52630 851 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 COPAP53621 1224 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 MFAP3P55082 362 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
SZRD1-201ENST00000401088 EFTUD2Q15029 972 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■□□□□ 10.6
SZRD1-201ENST00000401088 TMEM53Q6P2H8 277 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 AAGABQ6PD74 315 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 C12orf50Q8NA57 414 aaPredicted RBP12.87□□□□□ -0.35
SZRD1-201ENST00000401088 SMYD1Q8NB12 490 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 HAS1Q92839 578 aa12.87□□□□□ -0.35
SZRD1-201ENST00000401088 E2F7Q96AV8 911 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms