RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 ACTRT2Q8TDY3 377 aa5.6□□□□□ -1.51
SAMSN1-202ENST00000400564 P2RX7Q99572 595 aaKnown RBP5.6□□□□□ -1.51
SAMSN1-202ENST00000400564 ZMAT3Q9HA38 289 aaKnown RBP5.6□□□□□ -1.51
SAMSN1-202ENST00000400564 ALG13Q9NP73 1137 aaKnown RBP5.6□□□□□ -1.51
SAMSN1-202ENST00000400564 TCEAL9Q9UHQ7 104 aa5.6□□□□□ -1.51
SAMSN1-202ENST00000400564 DMTF1Q9Y222 760 aa5.6□□□□□ -1.51
SAMSN1-202ENST00000400564 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 A0A0B4J269 797 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 KIAA0355O15063 1070 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 DCLK1O15075 740 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 PEX1O43933 1283 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 TUSC2O75896 110 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 CHRM2P08172 466 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 SRGNP10124 158 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 PIM1P11309 404 aaPredicted RBP5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 NPR1P16066 1061 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 CXCR5P32302 372 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 ZNF134P52741 427 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 INHBEP58166 350 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 TUBB3Q13509 450 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 NXNQ6DKJ4 435 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 SWSAP1Q6NVH7 229 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 TFAP2BQ92481 460 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 FBXL20Q96IG2 436 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 SLC46A1Q96NT5 459 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 TTYH3Q9C0H2 523 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 PRDM13Q9H4Q3 707 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 FOXJ2Q9P0K8 574 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 CHPF2Q9P2E5 772 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 LRIT1Q9P2V4 623 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 DDX20Q9UHI6 824 aaKnown RBP5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 ZNHIT2Q9UHR6 403 aa5.59□□□□□ -1.51
SAMSN1-202ENST00000400564 VWC2LB2RUY7 222 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 PROM1O43490 865 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 RHOP08100 348 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 KITP10721 976 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 GCLCP48506 637 aaPredicted RBP5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 SIM1P81133 766 aaPredicted RBP5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 ZNF169Q14929 603 aaPredicted RBP5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 LLGL1Q15334 1064 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 SMN1Q16637 294 aaKnown RBP5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 MINDY4Q4G0A6 757 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 ANO6Q4KMQ2 910 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 ARHGAP29Q52LW3 1261 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 CCDC181Q5TID7 509 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 VPS53Q5VIR6 699 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 FAM160B1Q5W0V3 765 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 B3GALNT2Q8NCR0 500 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 DDX17Q92841 729 aaKnown RBP5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 ZG16BQ96DA0 208 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 SIK2Q9H0K1 926 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 ATP6V0A4Q9HBG4 840 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 HESX1Q9UBX0 185 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 RAD54BQ9Y620 910 aa5.58□□□□□ -1.52
SAMSN1-202ENST00000400564 NUDT3O95989 172 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 GRPP07492 148 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 ITGALP20701 1170 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 FOLR3P41439 243 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 AGFG1P52594 562 aaKnown RBP5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 PURAQ00577 322 aaKnown RBP5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 PRR16Q569H4 304 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 HSP90AB2PQ58FF8 381 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 RBM20Q5T481 1227 aaKnown RBP5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 KIAA0895LQ68EN5 471 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 TMEM108Q6UXF1 575 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 MYO1HQ8N1T3 1032 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 SIMC1Q8NDZ2 872 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 TPSD1Q9BZJ3 242 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 CNNM1Q9NRU3 951 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 SPATA31A3Q5VYP0 1347 aa5.57□□□□□ -1.52
SAMSN1-202ENST00000400564 A0A1W2PPL8 197 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 ADM5C9JUS6 153 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 PDHA1P08559 390 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 MAPK10P53779 464 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 TXNRD1Q16881 649 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 C14orf80Q86SX3 495 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 PEG10Q86TG7 708 aaKnown RBP5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 PDLIM2Q96JY6 352 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 ACTRT3Q9BYD9 372 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 AMBRA1Q9C0C7 1298 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 PIH1D1Q9NWS0 290 aaKnown RBP5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 MED16Q9Y2X0 877 aa5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 COL11A2P13942 1736 aaPredicted RBP5.56□□□□□ -1.52
SAMSN1-202ENST00000400564 ZAR1LA6NP61 321 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 VSTM5A8MXK1 200 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 MPPED1O15442 326 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 TRIAP1O43715 76 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 ELFN1P0C7U0 828 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 U2AF1L5P0DN76 240 aaPredicted RBP5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 CD6P30203 668 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 RARRES1P49788 294 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 UCP3P55916 312 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 LILRA4P59901 499 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 NANOS3P60323 173 aaKnown RBP5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 U2AF1Q01081 240 aaKnown RBP eCLIP5.55□□□□□ -1.524e-8■□□□□ 9.2
SAMSN1-202ENST00000400564 LONRF3Q496Y0 759 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 ZNF362Q5T0B9 420 aaPredicted RBP5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 KAZNQ674X7 775 aa5.55□□□□□ -1.52
SAMSN1-202ENST00000400564 MAEAQ7L5Y9 396 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms