RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 CHST12Q9NRB3 414 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 OGFRQ9NZT2 677 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 FBXL5Q9UKA1 691 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 GTF3C4Q9UKN8 822 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 PCDHB7Q9Y5E2 793 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 CILPO75339 1184 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 SOAT2O75908 522 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 MYOGP15173 224 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 RPL17P18621 184 aaKnown RBP12.45□□□□□ -0.42
SKA3-203ENST00000400018 SCP2P22307 547 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 VAV2P52735 878 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 IFRD2Q12894 506 aaPredicted RBP12.45□□□□□ -0.42
SKA3-203ENST00000400018 SURF1Q15526 300 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 TAF5Q15542 800 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 XKR4Q5GH76 650 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 SDHAF4Q5VUM1 108 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 DSTYKQ6XUX3 929 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 GPR152Q8TDT2 470 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 CLEC4CQ8WTT0 213 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 BCO2Q9BYV7 579 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
SKA3-203ENST00000400018 LRFN2Q9ULH4 789 aa12.45□□□□□ -0.42
SKA3-203ENST00000400018 TRIOO75962 3097 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 GOLGA8SH3BPF8 625 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 O00370 1275 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 PMM2O15305 246 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 IPO7O95373 1038 aaKnown RBP12.44□□□□□ -0.42
SKA3-203ENST00000400018 ATP1A1P05023 1023 aaKnown RBP12.44□□□□□ -0.42
SKA3-203ENST00000400018 RRM1P23921 792 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 TAF6P49848 677 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
SKA3-203ENST00000400018 CDR2Q01850 454 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 NOMO2Q5JPE7 1267 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 FAM109BQ6ICB4 259 aaPredicted RBP12.44□□□□□ -0.42
SKA3-203ENST00000400018 GLB1LQ6UWU2 654 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 MRPL10Q7Z7H8 261 aaKnown RBP12.44□□□□□ -0.42
SKA3-203ENST00000400018 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 SEPT8Q92599 483 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 CAPZA3Q96KX2 299 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 GPR62Q9BZJ7 368 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 NRDE2Q9H7Z3 1164 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 MYBPHLA2RUH7 354 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 AADACL2Q6P093 401 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 ADGRF2Q8IZF7 708 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 ANKRD7Q92527 254 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 CASD1Q96PB1 797 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 EPC1Q9H2F5 836 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 TMLHEQ9NVH6 421 aa12.44□□□□□ -0.42
SKA3-203ENST00000400018 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 M0QYV0 167 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 ZSCAN12O43309 604 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 PALMO75781 387 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 GABPB1Q06547 395 aaPredicted RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 KIF5AQ12840 1032 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 CCDC170Q8IYT3 715 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 TTC9BQ8N6N2 239 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 EMC1Q8N766 993 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 SYN2Q92777 582 aaPredicted RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 ACSF2Q96CM8 615 aaPredicted RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 KCNK16Q96T55 309 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 GIT1Q9Y2X7 761 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 ALPK3Q96L96 1907 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 ZNF623O75123 536 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 URI1O94763 535 aaPredicted RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 GJC1P36383 396 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 GNL1P36915 607 aaPredicted RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 RPL7AP62424 266 aaKnown RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 PKN2Q16513 984 aaKnown RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 MDH1BQ5I0G3 518 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 LRRTM3Q86VH5 581 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 TTC30AQ86WT1 665 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 APPL2Q8NEU8 664 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 ZNF653Q96CK0 615 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 CPXM1Q96SM3 734 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 MIS12Q9H081 205 aa12.43□□□□□ -0.42
SKA3-203ENST00000400018 DDX43Q9NXZ2 648 aaKnown RBP12.43□□□□□ -0.42
SKA3-203ENST00000400018 LCHNA4D1U4 455 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 NRP1O14786 923 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 GABBR2O75899 941 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 MICAL2O94851 1124 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 TCF4P15884 667 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 DNAJB2P25686 324 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 SLC11A1P49279 550 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 ZNF132P52740 706 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 CDK17Q00537 523 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
SKA3-203ENST00000400018 OR10T2Q8NGX3 314 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 DPF3Q92784 378 aa12.42□□□□□ -0.42
SKA3-203ENST00000400018 PDCD11Q14690 1871 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms