RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 NOTCH4Q99466 2003 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 TRIM66O15016 1216 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 TEX28O15482 410 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 NOL4O94818 638 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 SETSIPP0DME0 302 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 ANXA13P27216 316 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 MTIF2P46199 727 aaKnown RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 COPB1P53618 953 aaKnown RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 CTXN3Q4LDR2 81 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 TCEAL5Q5H9L2 206 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 ZNF677Q86XU0 584 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 RIN2Q8WYP3 895 aaPredicted RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 MYRFLQ96LU7 910 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 NUP58Q9BVL2 599 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 TTLL2Q9BWV7 592 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 ELOVL4Q9GZR5 314 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 INTS2Q9H0H0 1204 aaKnown RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 S1PR5Q9H228 398 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 TLE6Q9H808 572 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 ALG13Q9NP73 1137 aaKnown RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 SIX2Q9NPC8 291 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 FAM92AA1XBS5 289 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 PPEF2O14830 753 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 DDX6P26196 483 aaKnown RBP eCLIP8.04□□□□□ -1.12
USP16-204ENST00000399976 PBX1P40424 430 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 BRCC3P46736 316 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 GCLMP48507 274 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 MFAP3P55082 362 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 BPIFB4P59827 614 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 ROR1Q01973 937 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 TRIM14Q14142 442 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 EXOC3L4Q17RC7 722 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 FILIP1LQ4L180 1135 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 FKBP15Q5T1M5 1219 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 TRIM65Q6PJ69 517 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 SHC3Q92529 594 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 SYN2Q92777 582 aaPredicted RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 FAM212AQ96EL1 285 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 HNRNPABQ99729 332 aaKnown RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 CBX8Q9HC52 389 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 RTN4Q9NQC3 1192 aaKnown RBP8.04□□□□□ -1.12
USP16-204ENST00000399976 SIK3Q9Y2K2 1263 aa8.04□□□□□ -1.12
USP16-204ENST00000399976 SYCE3A1L190 88 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 CBFA2T2O43439 604 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 TPM3P06753 285 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 TRIM49P0CI25 452 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 TRIM49CP0CI26 452 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 HAPLN1P10915 354 aaPredicted RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 ACO1P21399 889 aaKnown RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 PDE6CP51160 858 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 RPL10AP62906 217 aaKnown RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 SNX30Q5VWJ9 437 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 BEND5Q7L4P6 421 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 TAS1R1Q7RTX1 841 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 GPR149Q86SP6 731 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 ITIH5Q86UX2 942 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 DRC7Q8IY82 874 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 SMRP1Q8NCR6 262 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 STK32AQ8WU08 396 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 SEMA4DQ92854 862 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 RIPOR3Q96MK2 946 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 POP1Q99575 1024 aaKnown RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 NT5C1AQ9BXI3 368 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 ADAM7Q9H2U9 754 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 APOBEC3GQ9HC16 384 aaKnown RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 UXTQ9UBK9 157 aaPredicted RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 PCDHB5Q9Y5E4 795 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 MTMR11A4FU01 709 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 XYLBO75191 536 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 SLC34A2O95436 690 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 GLP2RO95838 553 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 VDRP11473 427 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 PON1P27169 355 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 IRS1P35568 1242 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 STX17P56962 302 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 NR1I3Q14994 352 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 DCAF17Q5H9S7 520 aaPredicted RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 AOPEPQ8N6M6 819 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 RDH13Q8NBN7 331 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 MAFAQ8NHW3 353 aaPredicted RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 NXPE3Q969Y0 559 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 SYT15Q9BQS2 421 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 PRKD2Q9BZL6 878 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 GPR88Q9GZN0 384 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 SNX25Q9H3E2 840 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 FANCLQ9NW38 375 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 DDX43Q9NXZ2 648 aaKnown RBP8.03□□□□□ -1.12
USP16-204ENST00000399976 GCNT4Q9P109 453 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 SNX9Q9Y5X1 595 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 TRANK1O15050 2925 aa8.03□□□□□ -1.12
USP16-204ENST00000399976 CEP290O15078 2479 aa8.02□□□□□ -1.13
USP16-204ENST00000399976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
USP16-204ENST00000399976 WDR27A2RRH5 827 aa8.02□□□□□ -1.13
USP16-204ENST00000399976 HIDE1A8MVS5 230 aa8.02□□□□□ -1.13
USP16-204ENST00000399976 NT5C1B-RDH14C9J2C7 533 aa8.02□□□□□ -1.13
USP16-204ENST00000399976 GNL1P36915 607 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms