RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 DDX53Q86TM3 631 aaKnown RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 VPS36Q86VN1 386 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 OSTM1Q86WC4 334 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 IGSF21Q96ID5 467 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 TNIP3Q96KP6 325 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 RTP3Q9BQQ7 232 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 UBXN6Q9BZV1 441 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SNX25Q9H3E2 840 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 LZTS1Q9Y250 596 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 EPN1Q9Y6I3 576 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 NDUFA10O95299 355 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 ATP2A2P16615 1042 aaKnown RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 PCSK1P29120 753 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 RAP1GAPP47736 663 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 RPL34P49207 117 aaKnown RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 CDH8P55286 799 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 GSCP56915 257 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 RBM10P98175 930 aaKnown RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 SMARCB1Q12824 385 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 PKDCCQ504Y2 493 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 WSCD1Q658N2 575 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 KCNT2Q6UVM3 1135 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 LCLAT1Q6UWP7 414 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 TXLNBQ8N3L3 684 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 FIBCD1Q8N539 461 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 LNX1Q8TBB1 728 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 CALR3Q96L12 384 aaKnown RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 ISCUQ9H1K1 167 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CHST7Q9NS84 486 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CXXC1Q9P0U4 656 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 MAFFQ9ULX9 164 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 PCDHA11Q9Y5I1 949 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 BACE2Q9Y5Z0 518 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 PLXNA4Q9HCM2 1894 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 OR6C75A6NL08 312 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 H7C4K7 107 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 DDX3XO00571 662 aaKnown RBP eCLIP7.29□□□□□ -1.243e-11■■■■■ 50.4
USP16-203ENST00000399975 PJA2O43164 708 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CCP110O43303 1012 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 TADA2AO75478 443 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 ITGB1P05556 798 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SETSIPP0DME0 302 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 KRT5P13647 590 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 IGFBP6P24592 240 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 GNA15P30679 374 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 KIF11P52732 1056 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 KRT83P78385 493 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 BTG3Q14201 252 aaPredicted RBP7.29□□□□□ -1.24
USP16-203ENST00000399975 CLEC16AQ2KHT3 1053 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 FUT10Q6P4F1 479 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SCARA5Q6ZMJ2 495 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 THEM5Q8N1Q8 247 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 ZNF606Q8WXB4 792 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 ELMO3Q96BJ8 720 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 CCDC42Q96M95 316 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 TWNKQ96RR1 684 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 MMS19Q96T76 1030 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 YME1L1Q96TA2 773 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 ZCWPW1Q9H0M4 648 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 SPG21Q9NZD8 308 aa7.29□□□□□ -1.24
USP16-203ENST00000399975 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.29□□□□□ -1.24
USP16-203ENST00000399975 UPP2O95045 317 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 RB1P06400 928 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 PNMA6AP0CW24 399 aaPredicted RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 UNGP13051 313 aaPredicted RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 TNFAIP3P21580 790 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 BRCC3P46736 316 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 ALDH7A1P49419 539 aaKnown RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 UBE3AQ05086 875 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 MAPRE1Q15691 268 aaKnown RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 TAF3Q5VWG9 929 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 BCL7CQ8WUZ0 217 aaPredicted RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 VCPIP1Q96JH7 1222 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 HNRNPABQ99729 332 aaKnown RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 ZSWIM1Q9BR11 485 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 HSFX1Q9UBD0 423 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 HMGXB4Q9UGU5 601 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 SSX2IPQ9Y2D8 614 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 ADGRG1Q9Y653 693 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 ZBBXA8MT70 800 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 O00370 1275 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 RTN2O75298 545 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 SOD2P04179 222 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 PLEKP08567 350 aaPredicted RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 PTPN1P18031 435 aaKnown RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 CD58P19256 250 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 DSG1Q02413 1049 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 CREMQ03060 361 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 CENPCQ03188 943 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 ACAD10Q6JQN1 1059 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 ANKS3Q6ZW76 656 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 PHF13Q86YI8 300 aaPredicted RBP7.28□□□□□ -1.24
USP16-203ENST00000399975 B3GALNT2Q8NCR0 500 aa7.28□□□□□ -1.24
USP16-203ENST00000399975 OR6B3Q8NGW1 331 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms