RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SPTLC1O15269 473 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 KCNN4O15554 427 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 CUL4AQ13619 759 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 GIT2Q14161 759 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 ASPSCR1Q9BZE9 553 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 ARHGEF38Q9NXL2 777 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 SLC12A8A0AV02 714 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 HEATR9A2RTY3 570 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 CYP26A1O43174 497 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 ANXA9O76027 345 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 NPEPPSP55786 919 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 HPCAP84074 193 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 POU5F1BQ06416 359 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 MDH1BQ5I0G3 518 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 PSRC1Q6PGN9 363 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 HASPINQ8TF76 798 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 DTNBP1Q96EV8 351 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 OXCT2Q9BYC2 517 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 COPS7BQ9H9Q2 264 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 ZNF839A8K0R7 811 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 IFRD1O00458 451 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 NDUFA10O95299 355 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 VDRP11473 427 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 FMO5P49326 533 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 EIF3BP55884 814 aaKnown RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 PHLDB3Q6NSJ2 640 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 SMARCD1Q96GM5 515 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 CABS1Q96KC9 395 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 OMDQ99983 421 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 ADGRE3Q9BY15 652 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 CYP3A43Q9HB55 503 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 EPB41L4AQ9HCS5 686 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 ROBO1Q9Y6N7 1651 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 EFEMP1Q12805 493 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 PTK6Q13882 451 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 FAM110CQ1W6H9 321 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 AAK1Q2M2I8 961 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 FSCBQ5H9T9 825 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 CELF3Q5SZQ8 465 aaKnown RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 SYDE1Q6ZW31 735 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 SIRT2Q8IXJ6 389 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 C4orf19Q8IY42 314 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 SUSD6Q92537 303 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 RNF25Q96BH1 459 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 MKNK1Q9BUB5 465 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 NRBP1Q9UHY1 535 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 MRPS23Q9Y3D9 190 aaKnown RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 C5orf58C9J3I9 102 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 FOXP2O15409 715 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 EPHB4P54760 987 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 USP41Q3LFD5 358 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 TMEM86AQ8N2M4 240 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 FDXACB1Q9BRP7 624 aaPredicted RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 ZCCHC2Q9C0B9 1178 aaKnown RBP8.32□□□□□ -1.08
USP47-203ENST00000399455 ELOVL4Q9GZR5 314 aa8.32□□□□□ -1.08
USP47-203ENST00000399455 LRRC53A6NM62 1247 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 TXNDC9O14530 226 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 GUCY2CP25092 1073 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CHRNA3P32297 505 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 PDCLQ13371 301 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 VSTM4Q8IW00 320 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CGRRF1Q99675 332 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 TARS2Q9BW92 718 aaKnown RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 RAD18Q9NS91 495 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 RRN3Q9NYV6 651 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CNTNAP2Q9UHC6 1331 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 F5H423 210 aaPredicted RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 MTA2O94776 668 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 APOA4P06727 396 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 MAPK9P45984 424 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 ADAM2Q99965 735 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 TLE6Q9H808 572 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 PSD3Q9NYI0 1048 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 ZNF510Q9Y2H8 683 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CDY2AQ9Y6F7 541 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 FGGP02679 453 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 FLT3LGP49771 235 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 LIG3P49916 1009 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 RAP1GDS1P52306 607 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 GEMP55040 296 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 CCL23P55773 120 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 RHOAP61586 193 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SKP1P63208 163 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 ADCY2Q08462 1091 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 C6orf118Q5T5N4 469 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 UHMK1Q8TAS1 419 aaKnown RBP8.31□□□□□ -1.08
USP47-203ENST00000399455 UBA3Q8TBC4 463 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 SPDL1Q96EA4 605 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 MCEEQ96PE7 176 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 BPIFA3Q9BQP9 254 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 HEMGNQ9BXL5 484 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 MAF1Q9H063 256 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 UVRAGQ9P2Y5 699 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 RPN2P04844 631 aa8.31□□□□□ -1.08
USP47-203ENST00000399455 LGALS2P05162 132 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms