RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SLFN14P0C7P3 912 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 GJA1P17302 382 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 SNRPFP62306 86 aaKnown RBP14.43□□□□□ -0.1
VCX3A-202ENST00000398729 PRKCQQ04759 706 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 EHHADHQ08426 723 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 BFSP1Q12934 665 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 CUL4BQ13620 913 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 VEPH1Q14D04 833 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 MLF2Q15773 248 aaPredicted RBP14.43□□□□□ -0.1
VCX3A-202ENST00000398729 RSPO4Q2I0M5 234 aaPredicted RBP14.43□□□□□ -0.1
VCX3A-202ENST00000398729 MGAT5BQ3V5L5 792 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 FAM78AQ5JUQ0 283 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 TANGO2Q6ICL3 276 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 POTEHQ6S545 545 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 HS2ST1Q7LGA3 356 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 ITIH5Q86UX2 942 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 CBWD2Q8IUF1 395 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 NELFCDQ8IXH7 590 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 DCP1BQ8IZD4 617 aaKnown RBP14.43□□□□□ -0.1
VCX3A-202ENST00000398729 TTC9BQ8N6N2 239 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 SCFD1Q8WVM8 642 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 PSMG2Q969U7 264 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 SPATA32Q96LK8 384 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 ASB16Q96NS5 453 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 CNTNAP3BQ96NU0 1288 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 SEPT5Q99719 369 aaPredicted RBP14.43□□□□□ -0.1
VCX3A-202ENST00000398729 DDX23Q9BUQ8 820 aaKnown RBP14.43□□□□□ -0.1
VCX3A-202ENST00000398729 CNTNAP3Q9BZ76 1288 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 SLITRK6Q9H5Y7 841 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 AGPAT3Q9NRZ7 376 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 INTS13Q9NVM9 706 aa14.43□□□□□ -0.1
VCX3A-202ENST00000398729 CACNA1GO43497 2377 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 COL4A3Q01955 1670 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 MAP1BP46821 2468 aaKnown RBP14.42□□□□□ -0.1
VCX3A-202ENST00000398729 TGFB1I1O43294 461 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 MOSPD3O75425 235 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SOAT2O75908 522 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 FGF19O95750 216 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 TNNC2P02585 160 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 CMA1P23946 247 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 FCARP24071 287 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 TSPY1Q01534 308 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SNW1Q13573 536 aaKnown RBP14.42□□□□□ -0.1
VCX3A-202ENST00000398729 TEAD2Q15562 447 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 DUOXA2Q1HG44 320 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SLC44A4Q53GD3 710 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 ZC3H14Q6PJT7 736 aaKnown RBP14.42□□□□□ -0.1
VCX3A-202ENST00000398729 DNAJB7Q7Z6W7 309 aaPredicted RBP14.42□□□□□ -0.1
VCX3A-202ENST00000398729 TMC8Q8IU68 726 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 TMEM86AQ8N2M4 240 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 PDCL2Q8N4E4 241 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 RDH13Q8NBN7 331 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SHKBP1Q8TBC3 707 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 FAM200AQ8TCP9 573 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SPPL2BQ8TCT7 592 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 LEO1Q8WVC0 666 aaPredicted RBP14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SMARCD2Q92925 531 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 ZSWIM3Q96MP5 696 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 HINFPQ9BQA5 517 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 LRRC3Q9BY71 257 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 PLA2G2FQ9BZM2 168 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SLC39A2Q9NP94 309 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 GDAP2Q9NXN4 497 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 CGNQ9P2M7 1197 aaKnown RBP14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SERTAD1Q9UHV2 236 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SIX4Q9UIU6 781 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 ATP6V1DQ9Y5K8 247 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 SNX9Q9Y5X1 595 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 F5P12259 2224 aa14.42□□□□□ -0.1
VCX3A-202ENST00000398729 CFAP47Q6ZTR5 3102 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 A0A1W2PRU2 124 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 NRG2O14511 850 aaPredicted RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 CLIC2O15247 247 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 ACTN4O43707 911 aaKnown RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 MYL7Q01449 175 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 MYO1EQ12965 1108 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 TAF12Q16514 161 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 SNRNP35Q16560 246 aaKnown RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 NFE2Q16621 373 aaPredicted RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 KNOP1Q1ED39 458 aaKnown RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 BMT2Q1RMZ1 405 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 ZNF528Q3MIS6 628 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 LMBRD2Q68DH5 695 aaPredicted RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 LRRTM3Q86VH5 581 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 WDR49Q8IV35 697 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 GRAMD1CQ8IYS0 662 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 XXYLT1Q8NBI6 393 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 CXorf38Q8TB03 319 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 ZSCAN18Q8TBC5 510 aaPredicted RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 SPATA18Q8TC71 538 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 PAGE5Q96GU1 130 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 FAM84AQ96KN4 292 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 FNBP1Q96RU3 617 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 TRMT61BQ9BVS5 477 aaKnown RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 BRD9Q9H8M2 597 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 DDX43Q9NXZ2 648 aaKnown RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 ABI2Q9NYB9 513 aaPredicted RBP14.41□□□□□ -0.1
VCX3A-202ENST00000398729 USP25Q9UHP3 1055 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 L1RE1Q9UN81 338 aa14.41□□□□□ -0.1
VCX3A-202ENST00000398729 ZDHHC9Q9Y397 364 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms