RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 UGP2Q16851 508 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 ZPBP2Q6X784 338 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 DCP1BQ8IZD4 617 aaKnown RBP14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 C4orf33Q8N1A6 199 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 DDNO94850 711 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 RGS2P41220 211 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 YWHAHQ04917 246 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 CACNB2Q08289 660 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 CLEC16AQ2KHT3 1053 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 SYCP2LQ5T4T6 812 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 BTNL9Q6UXG8 535 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 SLC7A14Q8TBB6 771 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 TMEM120BA0PK00 339 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 H3BRB1 525 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 TBC1D12O60347 775 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 SNX2O60749 519 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 IL17AQ16552 155 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 ANO4Q32M45 955 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 MAP4K3Q8IVH8 894 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 ABRAQ8N0Z2 381 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 TUT1Q9H6E5 874 aaKnown RBP14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 ZBTB39O15060 712 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 ATICP31939 592 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 ALDH5A1P51649 535 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 KIZQ2M2Z5 673 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 GLRA4Q5JXX5 417 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 VSIG10LQ86VR7 867 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 GPC2Q8N158 579 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 TATDN2Q93075 761 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 DISP2A7MBM2 1401 aa14.89□□□□□ -0.03
PCDHGA11-201ENST00000398587 PTPRAP18433 802 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 LRRC55Q6ZSA7 311 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 ATPAF2Q8N5M1 289 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 EXD1Q8NHP7 514 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 TNFRSF25Q93038 417 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 OPTNQ96CV9 577 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 CLMNQ96JQ2 1002 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 SERPINB12Q96P63 405 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 TLR10Q9BXR5 811 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 ADAM33Q9BZ11 813 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 USP15Q9Y4E8 981 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 A0A087WZ62 844 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 RARGP13631 454 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 SMAD1Q15797 465 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 KIF19Q2TAC6 998 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 TFDP3Q5H9I0 405 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 FRA10AC1Q70Z53 315 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 FAM71DQ8N9W8 422 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 FDXACB1Q9BRP7 624 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 STOML1Q9UBI4 398 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 DDX3XO00571 662 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 ADCY3O60266 1144 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 SNRPAP09012 282 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 FASTKD1Q53R41 847 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 SPATA20Q8TB22 786 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 ATG4AQ8WYN0 398 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 P2RX7Q99572 595 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 ALG13Q9NP73 1137 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 CPSF2Q9P2I0 782 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 PEAK1Q9H792 1746 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 PHF20L1A8MW92 1017 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 INSRRP14616 1297 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 PTPN11Q06124 597 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 MAPRE1Q15691 268 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 HSP90AA5PQ58FG0 334 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 PPHLN1Q8NEY8 458 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 DDX50Q9BQ39 737 aaKnown RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 ECT2Q9H8V3 914 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 GBA2Q9HCG7 927 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 INTS13Q9NVM9 706 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 KLK14Q9P0G3 267 aa14.88□□□□□ -0.03
PCDHGA11-201ENST00000398587 VTNP04004 478 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 SREBF2Q12772 1141 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 PTK7Q13308 1070 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 ACOT1Q86TX2 421 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 FBXO25Q8TCJ0 367 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 PPP1R2P1Q96PQ5 205 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 XAB2Q9HCS7 855 aaKnown RBP14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 WHRNQ9P202 907 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 TMEM150BA6NC51 233 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 NKRFO15226 690 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 STRNO43815 780 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 RAD51Q06609 339 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 TATDN1Q6P1N9 297 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 ACSF2Q96CM8 615 aaPredicted RBP14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 RMDN1Q96DB5 314 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 GLT1D1Q96MS3 346 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 ZBTB18Q99592 522 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 ANKZF1Q9H8Y5 726 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 H0Y3Z8 333 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 KIF3CO14782 793 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 GCKP35557 465 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 NNMTP40261 264 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 LY6KQ17RY6 165 aa14.87□□□□□ -0.03
PCDHGA11-201ENST00000398587 GLIS3Q8NEA6 775 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms