RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 IMPDH2P12268 514 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 QARSP47897 775 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 DNA2P51530 1060 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 EPHB3P54753 998 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ROR1Q01973 937 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ACCSLQ4AC99 568 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PPP1R15BQ5SWA1 713 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 C10orf62Q5T681 223 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 DDX53Q86TM3 631 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 FERMT3Q86UX7 667 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 FAM83AQ86UY5 434 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ZC3HC1Q86WB0 502 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 VSIG1Q86XK7 387 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 TAGAPQ8N103 731 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PGBD3Q8N328 593 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PCYOX1LQ8NBM8 494 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SCYL1Q96KG9 808 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CALN1Q9BXU9 219 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 TRIT1Q9H3H1 467 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 C8orf4Q9NR00 106 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 IGSF5Q9NSI5 407 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 GMIPQ9P107 970 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 TBC1D14Q9P2M4 693 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.84□□□□□ -1.95
CHD9-202ENST00000398510 CNTNAP2Q9UHC6 1331 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ZSCAN5CA6NGD5 496 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 MYMKA6NI61 221 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SLC27A2O14975 620 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 INPP4BO15327 924 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 FGF10O15520 208 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 KRT1P04264 644 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ALPPL2P10696 532 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CHRNA3P32297 505 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CRKP46108 304 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 TUFMP49411 452 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 CEBPAP49715 358 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 BCAMP50895 628 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PDIA5Q14554 519 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 EDRF1Q3B7T1 1238 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 THEMIS2Q5TEJ8 643 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 LYPLAL1Q5VWZ2 237 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PDE12Q6L8Q7 609 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 LRRC49Q8IUZ0 686 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 DIS3L2Q8IYB7 885 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 KRT78Q8N1N4 520 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ACOT12Q8WYK0 555 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 MRPS31Q92665 395 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 CYFIP2Q96F07 1278 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 OLFM3Q96PB7 478 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 FAM167BQ9BTA0 163 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 PCDHB11Q9Y5F2 797 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 GUCA1CO95843 209 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 C6orf222P0C671 652 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 RBP3P10745 1247 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 DDX6P26196 483 aaKnown RBP eCLIP2.84□□□□□ -1.95
CHD9-202ENST00000398510 YWHABP31946 246 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 CASRP41180 1078 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 BCAT1P54687 386 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 AIF1P55008 147 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PFKPQ01813 784 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SLFNL1Q499Z3 407 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 FAM46CQ5VWP2 391 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 NAPEPLDQ6IQ20 393 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CYP4F22Q6NT55 531 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SMARCD1Q96GM5 515 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SNF8Q96H20 258 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 AHCYL2Q96HN2 611 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 HEXIM2Q96MH2 286 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 GPR20Q99678 358 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 EGFL8Q99944 293 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PDGFDQ9GZP0 370 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 TLR8Q9NR97 1041 aaKnown RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 CHST12Q9NRB3 414 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 BFARQ9NZS9 450 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 KLHL8Q9P2G9 620 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 KIAA1024Q9UPX6 916 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ADGRA2Q96PE1 1338 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 PITPNM2Q9BZ72 1349 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 RPS6KA5O75582 802 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SERPING1P05155 500 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 TCF3P15923 654 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CYP2C18P33260 490 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 MCAMP43121 646 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SERPINB9P50453 376 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 TMBIM6P55061 237 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 YWHAGP61981 247 aaKnown RBP eCLIP2.84□□□□□ -1.95
CHD9-202ENST00000398510 INPP5AQ14642 412 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ZNHIT3Q15649 155 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 KRT71Q3SY84 523 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ZNF467Q7Z7K2 595 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 SLC22A9Q8IVM8 553 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 DACT3Q96B18 629 aaPredicted RBP2.84□□□□□ -1.95
CHD9-202ENST00000398510 ZNF653Q96CK0 615 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 QRFPRQ96P65 431 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 CYTH2Q99418 400 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 MKNK1Q9BUB5 465 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 SPATA5L1Q9BVQ7 753 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 EHD4Q9H223 541 aa2.84□□□□□ -1.95
CHD9-202ENST00000398510 ARMT1Q9H993 441 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms