RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 MMS19Q96T76 1030 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 FUT8Q9BYC5 575 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 UBE2TQ9NPD8 197 aaPredicted RBP12.21□□□□□ -0.45
PPME1-202ENST00000398427 AAASQ9NRG9 546 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 SPG21Q9NZD8 308 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 DNAJC12Q9UKB3 198 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 L1RE1Q9UN81 338 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
PPME1-202ENST00000398427 SF3B1O75533 1304 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■■■■ 82.5
PPME1-202ENST00000398427 CYB561D2O14569 222 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 WEE2P0C1S8 567 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 CTNNB1P35222 781 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 BMPR1AP36894 532 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 RAB30Q15771 203 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 TMC6Q7Z403 805 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 LIMS2Q7Z4I7 341 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 B3GALT6Q96L58 329 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 NKX2-4Q9H2Z4 354 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 NLRC4Q9NPP4 1024 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 MTUS1Q9ULD2 1270 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
PPME1-202ENST00000398427 TIMM13Q9Y5L4 95 aaPredicted RBP12.2□□□□□ -0.46
PPME1-202ENST00000398427 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 A0A087WUV0 522 aaPredicted RBP12.2□□□□□ -0.46
PPME1-202ENST00000398427 FGF18O76093 207 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 GYPCP04921 128 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 P4HA1P13674 534 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 PAX3P23760 479 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 PPM1AP35813 382 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 RNF168Q8IYW5 571 aaPredicted RBP12.2□□□□□ -0.46
PPME1-202ENST00000398427 TOP6BLQ8N6T0 577 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 APPL2Q8NEU8 664 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 PLCD4Q9BRC7 762 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 MRPL45Q9BRJ2 306 aaKnown RBP12.2□□□□□ -0.46
PPME1-202ENST00000398427 GPR88Q9GZN0 384 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 FBXL5Q9UKA1 691 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 TRANK1O15050 2925 aa12.2□□□□□ -0.46
PPME1-202ENST00000398427 CARNS1A5YM72 827 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 KLHL33A6NCF5 533 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 TRAPPC3O43617 180 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 HUS1O60921 280 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 TPM1P09493 284 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 ODC1P11926 461 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 DNAJB2P25686 324 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 TKTP29401 623 aaKnown RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 RAPGEF1Q13905 1077 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 FIGNQ5HY92 759 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 TAS1R1Q7RTX1 841 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 UBR7Q8N806 425 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 CEP72Q9P209 647 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 MSRAQ9UJ68 235 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 PCDHB8Q9UN66 801 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 CYP11A1P05108 521 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 CD58P19256 250 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 RFX1P22670 979 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 MFAP3P55082 362 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 SMAD3P84022 425 aaKnown RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 E4F1Q66K89 784 aaPredicted RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 ADGRF2Q8IZF7 708 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 TGS1Q96RS0 853 aaKnown RBP12.19□□□□□ -0.46
PPME1-202ENST00000398427 CISHQ9NSE2 258 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 HMGXB4Q9UGU5 601 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 NME7Q9Y5B8 376 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 SZT2Q5T011 3432 aa12.19□□□□□ -0.46
PPME1-202ENST00000398427 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 HCRTO43612 131 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 TACC1O75410 805 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 FGFR3P22607 806 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.46
PPME1-202ENST00000398427 ELAVL2Q12926 359 aaKnown RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 TBX2Q13207 712 aaPredicted RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 DRAP1Q14919 205 aaPredicted RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 RTP2Q5QGT7 225 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 LRRC31Q6UY01 552 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 ENOSF1Q7L5Y1 443 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 OSTM1Q86WC4 334 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 SHC3Q92529 594 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 BAP1Q92560 729 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 PPP1R13BQ96KQ4 1090 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 NUP58Q9BVL2 599 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 A0A1W2PQJ5 194 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 EFCAB8A8MWE9 144 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms