RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 P3H1Q32P28 736 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 CAPN12Q6ZSI9 719 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 NR1H4Q96RI1 486 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 RBM15Q96T37 977 aaKnown RBP eCLIP16.84■□□□□ 0.299e-7■■■□□ 19
CHMP1A-201ENST00000397901 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 COMMD3-BMI1R4GMX3 469 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 MYPNQ86TC9 1320 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 FAM47DPA6NHR8 397 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 TBC1D12O60347 775 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 MAGEA4P43358 317 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 NSFP46459 744 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 MRPS9P82933 396 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 IL9RQ01113 521 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 CENPCQ03188 943 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 CYP24A1Q07973 514 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 MTMR1Q13613 665 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 STAT4Q14765 748 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 SPDYAQ5MJ70 313 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 SLC39A4Q6P5W5 647 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 CCDC89Q8N998 374 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 PPFIBP2Q8ND30 876 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 MRRFQ96E11 262 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 HAPLN3Q96S86 360 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 C11orf70Q9BRQ4 267 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 ADAM33Q9BZ11 813 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 OSBPL8Q9BZF1 889 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
CHMP1A-201ENST00000397901 EXOC1LA0A1B0GW35 172 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 POC1B-GALNT4F8VUJ3 575 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 CFHP08603 1231 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 T-ENOLP0DO92 83 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 FDX1P10109 184 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 PTPN4P29074 926 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 SLC1A1P43005 524 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 HSD17B4P51659 736 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 SNRPFP62306 86 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 DMP1Q13316 513 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 LSAMPQ13449 338 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 KHDC1Q4VXA5 237 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 LRRC74BQ6ZQY2 392 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 MAP4K3Q8IVH8 894 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 CPXCR1Q8N123 301 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 ANKRD35Q8N283 1001 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 BSNDQ8WZ55 320 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 VPS33BQ9H267 617 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 SAYSD1Q9NPB0 183 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 AVENQ9NQS1 362 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 TCEAL9Q9UHQ7 104 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF232Q9UNY5 417 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF510Q9Y2H8 683 aa16.83■□□□□ 0.28
CHMP1A-201ENST00000397901 PROSCO94903 275 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 FAM200BP0CF97 657 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 EIF2AK2P19525 551 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 C4orf50Q6ZRC1 276 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 TRIM42Q8IWZ5 723 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 GLIS1Q8NBF1 620 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 STKLD1Q8NE28 680 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 ZBED3Q96IU2 234 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 FAM213AQ9BRX8 229 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 SLCO1B3Q9NPD5 702 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 KMT5AQ9NQR1 393 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 C1orf112Q9NSG2 853 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 HNRNPCL1O60812 293 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 LGR5O75473 907 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 ZSCAN5DPP0CG00 497 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 SLC34A1Q06495 639 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 RCN1Q15293 331 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 CCNG2Q16589 344 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 ZFYVE27Q5T4F4 411 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 KAZNQ674X7 775 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 AGBL3Q8NEM8 1001 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 NRG4Q8WWG1 115 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 MAML1Q92585 1016 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 MFSD14AQ96MC6 490 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 EURLQ9NYK6 297 aa16.82■□□□□ 0.28
CHMP1A-201ENST00000397901 PI4K2BG5E9Z4 385 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 ATP6V1G1O75348 118 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 MYCLP12524 364 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 AP1B1Q10567 949 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 SH2D4BQ5SQS7 431 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 SPOPLQ6IQ16 392 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 ZNF449Q6P9G9 518 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 C4orf33Q8N1A6 199 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 BBOF1Q8ND07 529 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 TMC2Q8TDI7 906 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 CENPKQ9BS16 269 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 MIS12Q9H081 205 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 UBIAD1Q9Y5Z9 338 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 HNRNPDLO14979 420 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 MAP3K7O43318 606 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 PLA2G6O60733 806 aa16.81■□□□□ 0.28
CHMP1A-201ENST00000397901 LYPLA2O95372 231 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms