RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CACNG4Q9UBN1 327 aa20.57■□□□□ 0.88
PDLIM2-204ENST00000397760 SPTLC1O15269 473 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 CHRNB2P17787 502 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 ITGB8P26012 769 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 RPL9P32969 192 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 CDR2Q01850 454 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 C10orf76Q5T2E6 689 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 ALKBH5Q6P6C2 394 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 DDX1Q92499 740 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 NAGPAQ9UK23 515 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 HPCAL4Q9UM19 191 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 ATP8B3O60423 1300 aa20.56■□□□□ 0.88
PDLIM2-204ENST00000397760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 CASTOR2A6NHX0 329 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 PODXLO00592 558 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 MOCS3O95396 460 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 MMEP08473 750 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 RAG1P15918 1043 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 TNFRSF8P28908 595 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 GNA15P30679 374 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 PAFAH1B1P43034 410 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 CLCNKBP51801 687 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 HNRNPH2P55795 449 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 LILRA4P59901 499 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 NOMO2Q5JPE7 1267 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 CNKSR3Q6P9H4 555 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 URGCPQ8TCY9 931 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 GDAP2Q9NXN4 497 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 CWC15Q9P013 229 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 LRFN2Q9ULH4 789 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 BTNL10A8MVZ5 291 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 ZNF185O15231 689 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 FMO1Q01740 532 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 TUSC3Q13454 348 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 IKBKEQ14164 716 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 ZNF677Q86XU0 584 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 TTC39CQ8N584 583 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 SPATA4Q8NEY3 305 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 VWCEQ96DN2 955 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 FAM124BQ9H5Z6 455 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 NENFQ9UMX5 172 aa20.55■□□□□ 0.88
PDLIM2-204ENST00000397760 TANC1Q9C0D5 1861 aa20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 CILPO75339 1184 aa20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 ACTN2P35609 894 aa20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 WHAMMQ8TF30 809 aa20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 DDX27Q96GQ7 796 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 KANSL3Q9P2N6 904 aa20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 BARX2Q9UMQ3 279 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 FAN1Q9Y2M0 1017 aa20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 PDCD11Q14690 1871 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-204ENST00000397760 LMAN1P49257 510 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 INCA1Q0VD86 236 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 UPP1Q16831 310 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 SOWAHAQ2M3V2 549 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 PALB2Q86YC2 1186 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 ABI1Q8IZP0 508 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 AENQ8WTP8 325 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 PCDHB18PQ96TA0 734 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 PAAF1Q9BRP4 392 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 TMCO5BA8MYB1 307 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 THAP12O43422 761 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 IVLP07476 585 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 CSF2RAP15509 400 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 IGFBP6P24592 240 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 TNNT3P45378 269 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 NDST1P52848 882 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 RAD23BP54727 409 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 ZSCAN26Q16670 478 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 CCDC181Q5TID7 509 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 MFSD5Q6N075 450 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 CRIPAKQ8N1N5 446 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 TMEM199Q8N511 208 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 GOLGA6L1Q8N7Z2 621 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 TMEM176AQ96HP8 235 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 UROC1Q96N76 676 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 TWNKQ96RR1 684 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 MRPL45Q9BRJ2 306 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 ELOVL4Q9GZR5 314 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 HMGXB4Q9UGU5 601 aa20.53■□□□□ 0.88
PDLIM2-204ENST00000397760 SCN5AQ14524 2016 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 GRID2IPA4D2P6 1211 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 HUS1O60921 280 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 PAEPP09466 180 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 C2orf54Q08AI8 447 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 LEKR1Q6ZMV7 388 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 DNAAF5Q86Y56 855 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 APPL2Q8NEU8 664 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 TET1Q8NFU7 2136 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 ZNF606Q8WXB4 792 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 SELENOOQ9BVL4 669 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 TLR10Q9BXR5 811 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 PACSIN1Q9BY11 444 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 TBC1D13Q9NVG8 400 aa20.52■□□□□ 0.88
PDLIM2-204ENST00000397760 CES2O00748 559 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 CYB561D2O14569 222 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 HOXA2O43364 376 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 DDHD2O94830 711 aa20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 SYF2O95926 243 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-204ENST00000397760 RNASELQ05823 741 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms