RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 RBM41Q96IZ5 413 aaKnown RBP15.83■□□□□ 0.12
CBX3-202ENST00000396386 ELOVL4Q9GZR5 314 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 HOMER3Q9NSC5 361 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 MTRF1LQ9UGC7 380 aaKnown RBP15.83■□□□□ 0.12
CBX3-202ENST00000396386 HMGXB4Q9UGU5 601 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 GINS2Q9Y248 185 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 PTPN22Q9Y2R2 807 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 DERAQ9Y315 318 aa15.83■□□□□ 0.12
CBX3-202ENST00000396386 MBLAC1A4D2B0 266 aaPredicted RBP15.82■□□□□ 0.12
CBX3-202ENST00000396386 GPR32O75388 356 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 RALAP11233 206 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 CAPN2P17655 700 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 PLTPP55058 493 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 PIGHQ14442 188 aaPredicted RBP15.82■□□□□ 0.12
CBX3-202ENST00000396386 LLGL1Q15334 1064 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 CEP85LQ5SZL2 805 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 LRRC38Q5VT99 294 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 NIPA2Q8N8Q9 360 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 LENG1Q96BZ8 264 aaPredicted RBP15.82■□□□□ 0.12
CBX3-202ENST00000396386 TMEM176AQ96HP8 235 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 TWNKQ96RR1 684 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 HERPUD2Q9BSE4 406 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 TXLNGYQ9BZA5 131 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 DCLK3Q9C098 648 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 PLEKHA5Q9HAU0 1116 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 KRT1P04264 644 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 RGS2P41220 211 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 KCNJ1P48048 391 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 PSEN2P49810 448 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 CPT1AP50416 773 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 GSCP56915 257 aaPredicted RBP15.82■□□□□ 0.12
CBX3-202ENST00000396386 KRT17Q04695 432 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 INCA1Q0VD86 236 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
CBX3-202ENST00000396386 ORC1Q13415 861 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 NOTUMQ6P988 496 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 FBXO25Q8TCJ0 367 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 USP6NLQ92738 828 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 SNX27Q96L92 541 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 OSMRQ99650 979 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 APBA2Q99767 749 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 OSBPL8Q9BZF1 889 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 CHST7Q9NS84 486 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 WDR35Q9P2L0 1181 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
CBX3-202ENST00000396386 ATP8A1Q9Y2Q0 1164 aa15.82■□□□□ 0.12
CBX3-202ENST00000396386 HMGB1P1B2RPK0 211 aaPredicted RBP15.81■□□□□ 0.12
CBX3-202ENST00000396386 H0YGN5 161 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 GOLGA8SH3BPF8 625 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 MICAL2O94851 1124 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 GAS8O95995 478 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 VDRP11473 427 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 DARSP14868 501 aaKnown RBP15.81■□□□□ 0.12
CBX3-202ENST00000396386 YARSP54577 528 aaKnown RBP15.81■□□□□ 0.12
CBX3-202ENST00000396386 OGDHQ02218 1023 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 MYO1EQ12965 1108 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 SNX1Q13596 522 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 LEKR1Q6ZMV7 388 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 RUFY4Q6ZNE9 571 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 SOCS4Q8WXH5 440 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 ATG4AQ8WYN0 398 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 ATP6V1G3Q96LB4 118 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 AP5M1Q9H0R1 490 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 CYTH4Q9UIA0 394 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 BARX2Q9UMQ3 279 aaPredicted RBP15.81■□□□□ 0.12
CBX3-202ENST00000396386 NFS1Q9Y697 457 aa15.81■□□□□ 0.12
CBX3-202ENST00000396386 M0QYV0 167 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 HAS3O00219 553 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 ITGBL1O95965 494 aaPredicted RBP15.8■□□□□ 0.12
CBX3-202ENST00000396386 MYL3P08590 195 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 MYZAPP0CAP1 466 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 HOXA11P31270 313 aaPredicted RBP15.8■□□□□ 0.12
CBX3-202ENST00000396386 PSMC1P62191 440 aaKnown RBP15.8■□□□□ 0.12
CBX3-202ENST00000396386 ZNF844Q08AG5 666 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 CALCOCO2Q13137 446 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 PTK6Q13882 451 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 CCL14Q16627 93 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 ZFYVE27Q5T4F4 411 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 RCOR2Q8IZ40 523 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 HEMGNQ9BXL5 484 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 SYNCQ9H7C4 482 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 TMBIM4Q9HC24 238 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 KLHL11Q9NVR0 708 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 DDX56Q9NY93 547 aaKnown RBP15.8■□□□□ 0.12
CBX3-202ENST00000396386 SNTG2Q9NY99 539 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 FEZ2Q9UHY8 353 aaPredicted RBP15.8■□□□□ 0.12
CBX3-202ENST00000396386 SIGLEC16A6NMB1 481 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 HMGCRP04035 888 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 AXLP30530 894 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 NFX1Q12986 1120 aaKnown RBP15.8■□□□□ 0.12
CBX3-202ENST00000396386 C17orf99Q6UX52 265 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 SH2D3CQ8N5H7 860 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 PPP1R13LQ8WUF5 828 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 ART4Q93070 314 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 CCDC114Q96M63 670 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 SLITRK1Q96PX8 696 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 CPXM1Q96SM3 734 aa15.8■□□□□ 0.12
CBX3-202ENST00000396386 EIF2AQ9BY44 585 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms