RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CLIC2O15247 247 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 ACAT1P24752 427 aaKnown RBP19.7■□□□□ 0.74
FXN-203ENST00000396366 GABRR2P28476 465 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 GDI1P31150 447 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 PNPLA4P41247 253 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 CCDC142Q17RM4 750 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 UNC13DQ70J99 1090 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 OSTM1Q86WC4 334 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 SCFD1Q8WVM8 642 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 MKNK1Q9BUB5 465 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 ATXN3LQ9H3M9 355 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 BRD9Q9H8M2 597 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 TRPV4Q9HBA0 871 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 SLC39A2Q9NP94 309 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 AGPAT3Q9NRZ7 376 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 INTS13Q9NVM9 706 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 ABI2Q9NYB9 513 aaPredicted RBP19.7■□□□□ 0.74
FXN-203ENST00000396366 HSFX1Q9UBD0 423 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 SERTAD1Q9UHV2 236 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 ITGA11Q9UKX5 1188 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 CFAP45Q9UL16 551 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 ASB3Q9Y575 518 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 SNX9Q9Y5X1 595 aa19.7■□□□□ 0.74
FXN-203ENST00000396366 HEPACAM2A8MVW5 462 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 EIF3DO15371 548 aaKnown RBP eCLIP19.69■□□□□ 0.74
FXN-203ENST00000396366 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 HAPLN1P10915 354 aaPredicted RBP19.69■□□□□ 0.74
FXN-203ENST00000396366 PSMC3P17980 439 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 TUFMP49411 452 aaKnown RBP19.69■□□□□ 0.74
FXN-203ENST00000396366 GPR15P49685 360 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 RBP5P82980 135 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 ATL3Q6DD88 541 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 LRRC52Q8N7C0 313 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 STKLD1Q8NE28 680 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 LRRC3BQ96PB8 259 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 PI4K2AQ9BTU6 479 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 LTB4R2Q9NPC1 389 aa19.69■□□□□ 0.74
FXN-203ENST00000396366 DDX43Q9NXZ2 648 aaKnown RBP19.69■□□□□ 0.74
FXN-203ENST00000396366 TICRRQ7Z2Z1 1910 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 KIAA0391O15091 583 aaKnown RBP19.68■□□□□ 0.74
FXN-203ENST00000396366 HUS1O60921 280 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 TARSP26639 723 aaKnown RBP19.68■□□□□ 0.74
FXN-203ENST00000396366 CYP2J2P51589 502 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 CYP4F8P98187 520 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 SDHAF4Q5VUM1 108 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 ITIH5Q86UX2 942 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 ARID3BQ8IVW6 561 aaPredicted RBP19.68■□□□□ 0.74
FXN-203ENST00000396366 C1orf210Q8IVY1 113 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 MFSD6LQ8IWD5 586 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 DCP1BQ8IZD4 617 aaKnown RBP19.68■□□□□ 0.74
FXN-203ENST00000396366 MAML2Q8IZL2 1156 aaPredicted RBP19.68■□□□□ 0.74
FXN-203ENST00000396366 GPR88Q9GZN0 384 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 MAGEF1Q9HAY2 307 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 IL21Q9HBE4 155 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 GDAP2Q9NXN4 497 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 PCDHB5Q9Y5E4 795 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 CFAP54Q96N23 3096 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 COL4A2P08572 1712 aa19.68■□□□□ 0.74
FXN-203ENST00000396366 PRR23AA6NEV1 266 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 FZD5Q13467 585 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 SNRNP35Q16560 246 aaKnown RBP19.67■□□□□ 0.74
FXN-203ENST00000396366 SOWAHAQ2M3V2 549 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 GPR158Q5T848 1215 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 SPPL2BQ8TCT7 592 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 C2orf15Q8WU43 125 aaKnown RBP19.67■□□□□ 0.74
FXN-203ENST00000396366 DNASE1L2Q92874 299 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 IRF7Q92985 503 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 PAGE5Q96GU1 130 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 ANKRD36BP1Q96IX9 119 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 PKMYT1Q99640 499 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 ACBD6Q9BR61 282 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 GTF3C4Q9UKN8 822 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 R4GN57 208 aa19.67■□□□□ 0.74
FXN-203ENST00000396366 A0A1B0GVL5 298 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 PVALEFA0A1B0GWK0 134 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 ZNF263O14978 683 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 ACTN4O43707 911 aaKnown RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 KLRC4O43908 158 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 PRPF40AO75400 957 aaKnown RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 CST3P01034 146 aaPredicted RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 TNNC2P02585 160 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 SP9P0CG40 484 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 CYP2F1P24903 491 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 TSPY1Q01534 308 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 VEPH1Q14D04 833 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 DUOXA2Q1HG44 320 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 ZNF852Q6ZMS4 543 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 TMEM86AQ8N2M4 240 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 NKD2Q969F2 451 aaPredicted RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 CCDC127Q96BQ5 260 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 HPDLQ96IR7 371 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 BCO2Q9BYV7 579 aa19.66■□□□□ 0.74
FXN-203ENST00000396366 SMG9Q9H0W8 520 aaKnown RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 SPATA6Q9NWH7 488 aaPredicted RBP19.66■□□□□ 0.74
FXN-203ENST00000396366 MYBPHLA2RUH7 354 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 ARNTLO00327 626 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 GABRDO14764 452 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 ATP2C2O75185 946 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 PRAMEF12O95522 483 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms