RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 TNFSF9P41273 254 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 MCCD1P59942 119 aaPredicted RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 CYP24A1Q07973 514 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 MYBPC2Q14324 1141 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 CLEC16AQ2KHT3 1053 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 CRELD2Q6UXH1 353 aaPredicted RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 TRIM50Q86XT4 487 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 CTAGE3PQ8IX95 158 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 DDX1Q92499 740 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 SEC14L1Q92503 715 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 MSTO1Q9BUK6 570 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 AS3MTQ9HBK9 375 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 UBN1Q9NPG3 1134 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 RBAKQ9NYW8 714 aaPredicted RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 LGR5O75473 907 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 CNMDO75829 334 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 KRT4P19013 534 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 ZBTB16Q05516 673 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 MGAT5Q09328 741 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 STRN3Q13033 797 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 SUPT20HL1Q3ZLR7 823 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 TDRD10Q5VZ19 366 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 LRRC71Q8N4P6 559 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 RSRC1Q96IZ7 334 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 IFT74Q96LB3 600 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 MFSD14AQ96MC6 490 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 CCDC77Q9BR77 488 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 NTPCRQ9BSD7 190 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 MYLK2Q9H1R3 596 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 TRABDQ9H4I3 376 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 TMEM8AQ9HCN3 771 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 ADARB2Q9NS39 739 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 ENO4A6NNW6 628 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 IRF6O14896 467 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 TP73O15350 636 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 ENTPD5O75356 428 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 PGK2P07205 417 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 GLRA2P23416 452 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 EPHB2P29323 1055 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 OAZ1P54368 228 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 COPS2P61201 443 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 EMC2Q15006 297 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 PPP2R5EQ16537 467 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 SGSM1Q2NKQ1 1148 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 NOL9Q5SY16 702 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 ISLR2Q6UXK2 745 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 ECHDC2Q86YB7 292 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 RHPN2Q8IUC4 686 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 GPD1LQ8N335 351 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 SAMD3Q8N6K7 520 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 RBBP8NLQ8NC74 664 aaPredicted RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 ATL2Q8NHH9 583 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 PSPC1Q8WXF1 523 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 TTC17Q96AE7 1141 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 RPS6KC1Q96S38 1066 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 TRIM56Q9BRZ2 755 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 PPP1R12CQ9BZL4 782 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 KDM4CQ9H3R0 1056 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 AGO2Q9UKV8 859 aaKnown RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 ZMYND8Q9ULU4 1186 aaPredicted RBP9.8□□□□□ -0.84
NDE1-201ENST00000396354 EXOC7Q9UPT5 735 aa9.8□□□□□ -0.84
NDE1-201ENST00000396354 CFAP69A5D8W1 941 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 K7ERI5 159 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 EPHX2P34913 555 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 CDH8P55286 799 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 IGBP1P78318 339 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 LACTBP83111 547 aaPredicted RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 TFDP1Q14186 410 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 PREPLQ4J6C6 727 aaPredicted RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 LBX2Q6XYB7 198 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 PIGWQ7Z7B1 504 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 DEPTORQ8TB45 409 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 LRRC8CQ8TDW0 803 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 CD101Q93033 1021 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 MTMR12Q9C0I1 747 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 APOBEC3GQ9HC16 384 aaKnown RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 NUB1Q9Y5A7 615 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 C5orf60A6NFR6 353 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 C19orf81C9J6K1 198 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 AVILO75366 819 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 VNN1O95497 513 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 CST3P01034 146 aaPredicted RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 CYP1A2P05177 515 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 FDX1P10109 184 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 ADRA1DP25100 572 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 MSH2P43246 934 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 WDR4P57081 412 aaKnown RBP9.79□□□□□ -0.84
NDE1-201ENST00000396354 XRCC4Q13426 336 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 ALCAMQ13740 583 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 TAF5Q15542 800 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 LY6KQ17RY6 165 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 LIN9Q5TKA1 542 aa9.79□□□□□ -0.84
NDE1-201ENST00000396354 CEP120Q8N960 986 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms