RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RNF19BQ6ZMZ0 732 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 DCP1BQ8IZD4 617 aaKnown RBP20.53■□□□□ 0.88
HOXA9-202ENST00000396345 EHBP1Q8NDI1 1231 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 ANKRD20A12PQ8NF67 263 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 TATDN2Q93075 761 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 FAXDC2Q96IV6 333 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 BCO2Q9BYV7 579 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 SDCBP2Q9H190 292 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 NDST4Q9H3R1 872 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 CYP3A43Q9HB55 503 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 AFF4Q9UHB7 1163 aaKnown RBP20.53■□□□□ 0.88
HOXA9-202ENST00000396345 EYSQ5T1H1 3165 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 H3BQ06 376 aaPredicted RBP20.52■□□□□ 0.88
HOXA9-202ENST00000396345 PES1O00541 588 aaKnown RBP20.52■□□□□ 0.88
HOXA9-202ENST00000396345 HCRTO43612 131 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 ATF2P15336 505 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 HOXB8P17481 243 aaPredicted RBP20.52■□□□□ 0.88
HOXA9-202ENST00000396345 ELF1P32519 619 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 ADCY1Q08828 1119 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 LRMPQ12912 555 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 IQCB1Q15051 598 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 KRT31Q15323 416 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 MIIPQ5JXC2 388 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 LIN9Q5TKA1 542 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 LMO3Q8TAP4 145 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 MSLNLQ96KJ4 702 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 SYT15Q9BQS2 421 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 HSD3B7Q9H2F3 369 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 CBX8Q9HC52 389 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 TAB2Q9NYJ8 693 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 CDH9Q9ULB4 789 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 MAFFQ9ULX9 164 aa20.52■□□□□ 0.88
HOXA9-202ENST00000396345 A8MXQ7 604 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 TPM2P07951 284 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 ZNF18P17022 549 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 CLUL1Q15846 466 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 INTS6LQ5JSJ4 861 aaKnown RBP20.51■□□□□ 0.87
HOXA9-202ENST00000396345 SYCE2Q6PIF2 218 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 LRSAM1Q6UWE0 723 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 GBP6Q6ZN66 633 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 CCDC149Q6ZUS6 474 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 LRRTM3Q86VH5 581 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 C12orf76Q8N812 135 aaPredicted RBP20.51■□□□□ 0.87
HOXA9-202ENST00000396345 NT5C1BQ96P26 610 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 PGLYRP2Q96PD5 576 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 CRACR2AQ9BSW2 395 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 INTS2Q9H0H0 1204 aaKnown RBP20.51■□□□□ 0.87
HOXA9-202ENST00000396345 CYP4F11Q9HBI6 524 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 GCNT4Q9P109 453 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 THEGQ9P2T0 379 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 CD207Q9UJ71 328 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 NME7Q9Y5B8 376 aa20.51■□□□□ 0.87
HOXA9-202ENST00000396345 GTPBP10A4D1E9 387 aaKnown RBP20.5■□□□□ 0.87
HOXA9-202ENST00000396345 MTMR11A4FU01 709 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 PRRG1O14668 218 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 C8AP07357 584 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 SMARCB1Q12824 385 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 CUL2Q13617 745 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 UVSSAQ2YD98 709 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 RARS2Q5T160 578 aaKnown RBP20.5■□□□□ 0.87
HOXA9-202ENST00000396345 TCEAL8Q8IYN2 117 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 SLC7A14Q8TBB6 771 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 APOL5Q9BWW9 433 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 VPS16Q9H269 839 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 TSPY26PQ9H489 355 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 SFXN1Q9H9B4 322 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 LIMA1Q9UHB6 759 aaKnown RBP20.5■□□□□ 0.87
HOXA9-202ENST00000396345 GTF3C4Q9UKN8 822 aa20.5■□□□□ 0.87
HOXA9-202ENST00000396345 ATP2C2O75185 946 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 RFPL2O75678 378 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 ZMYND10O75800 440 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 SEC24AO95486 1093 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 VNN2O95498 520 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 CD58P19256 250 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
HOXA9-202ENST00000396345 PSMC1P62191 440 aaKnown RBP20.49■□□□□ 0.87
HOXA9-202ENST00000396345 TFF2Q03403 129 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 INCA1Q0VD86 236 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 NFE2Q16621 373 aaPredicted RBP20.49■□□□□ 0.87
HOXA9-202ENST00000396345 EXOC3L4Q17RC7 722 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 LEXMQ3ZCV2 418 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 PPM1LQ5SGD2 360 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 RTL10Q7L3V2 364 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 UNC93AQ86WB7 457 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 ATAD1Q8NBU5 361 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 C2orf15Q8WU43 125 aaKnown RBP20.49■□□□□ 0.87
HOXA9-202ENST00000396345 PKMYT1Q99640 499 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 S1PR5Q9H228 398 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 TMLHEQ9NVH6 421 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 ZDHHC7Q9NXF8 308 aa20.49■□□□□ 0.87
HOXA9-202ENST00000396345 PRUNE2Q8WUY3 3088 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 CCDC195A0A1B0GUA6 201 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 MYBPHLA2RUH7 354 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 ATP1A3P13637 1013 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 PTPN1P18031 435 aaKnown RBP20.48■□□□□ 0.87
HOXA9-202ENST00000396345 TBXAS1P24557 533 aaPredicted RBP20.48■□□□□ 0.87
HOXA9-202ENST00000396345 CDR1P51861 262 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 NDST1P52848 882 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 ITIH3Q06033 890 aa20.48■□□□□ 0.87
HOXA9-202ENST00000396345 DUSP4Q13115 394 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms