RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 FAM171A1Q5VUB5 890 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 WSCD1Q658N2 575 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 SCARA3Q6AZY7 606 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 CD300LGQ6UXG3 332 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 CCDC186Q7Z3E2 898 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 DDX53Q86TM3 631 aaKnown RBP10.52□□□□□ -0.72
DDX39B-202ENST00000396172 KBTBD7Q8WVZ9 684 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 TGS1Q96RS0 853 aaKnown RBP10.52□□□□□ -0.72
DDX39B-202ENST00000396172 TTPALQ9BTX7 342 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 C11orf84Q9BUA3 381 aaPredicted RBP10.52□□□□□ -0.72
DDX39B-202ENST00000396172 SDCBP2Q9H190 292 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 PUF60Q9UHX1 559 aaKnown RBP10.52□□□□□ -0.72
DDX39B-202ENST00000396172 CDH9Q9ULB4 789 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 STXBP5LQ9Y2K9 1186 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 MYO9BQ13459 2157 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 GREB1Q4ZG55 1949 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 PLXNA3P51805 1871 aa10.52□□□□□ -0.72
DDX39B-202ENST00000396172 ATP8B3O60423 1300 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 GABRDO14764 452 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 CTIFO43310 598 aaKnown RBP10.52□□□□□ -0.73
DDX39B-202ENST00000396172 URODP06132 367 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 GNA15P30679 374 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 BMPR1AP36894 532 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 GLUD2P49448 558 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 CDH8P55286 799 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 KIAA1841Q6NSI8 718 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 PPP1R2P3Q6NXS1 205 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 CYP26C1Q6V0L0 522 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 TMTC1Q8IUR5 882 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 RNF168Q8IYW5 571 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-202ENST00000396172 ANKRD7Q92527 254 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 ELMO3Q96BJ8 720 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 ACBD6Q9BR61 282 aa10.52□□□□□ -0.73
DDX39B-202ENST00000396172 MRPL45Q9BRJ2 306 aaKnown RBP10.52□□□□□ -0.73
DDX39B-202ENST00000396172 DDX43Q9NXZ2 648 aaKnown RBP10.52□□□□□ -0.73
DDX39B-202ENST00000396172 SSU72P8A0A1W2PR75 194 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 OR6C75A6NL08 312 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 FGF18O76093 207 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 OAZ2O95190 189 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 CA3P07451 260 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 VDRP11473 427 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 FECHP22830 423 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 TKTP29401 623 aaKnown RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 PBX3P40426 434 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 RABGGTBP53611 331 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 SMAD3P84022 425 aaKnown RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 ARID5AQ03989 594 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 SGO2Q562F6 1265 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 PIK3R5Q8WYR1 880 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 BAG1Q99933 345 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 GPR62Q9BZJ7 368 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.51□□□□□ -0.733e-7■■■□□ 15.3
DDX39B-202ENST00000396172 CEP83Q9Y592 693 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 LCHNA4D1U4 455 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 F8W810 466 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 I3L4J1 428 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 CYP26A1O43174 497 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 EFEMP2O95967 443 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 LINC00271P0C7V0 271 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 CYLC1P35663 651 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 RAD23BP54727 409 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 SMARCB1Q12824 385 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 TRIM72Q6ZMU5 477 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 TMEM173Q86WV6 379 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 CEP57Q86XR8 500 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 DCP1BQ8IZD4 617 aaKnown RBP10.51□□□□□ -0.73
DDX39B-202ENST00000396172 CRYBG2Q8N1P7 616 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 SLC4A11Q8NBS3 891 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 B3GALNT2Q8NCR0 500 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
DDX39B-202ENST00000396172 RNF225M0QZC1 329 aaPredicted RBP10.5□□□□□ -0.73
DDX39B-202ENST00000396172 THAP12O43422 761 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 LPXNO60711 386 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 IPO7O95373 1038 aaKnown RBP10.5□□□□□ -0.73
DDX39B-202ENST00000396172 CD19P15391 556 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 CYP11B1P15538 503 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 ERVK-21P61565 698 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 DSG1Q02413 1049 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
DDX39B-202ENST00000396172 PSMD5Q16401 504 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 CTXN3Q4LDR2 81 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 ZNF394Q53GI3 561 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
DDX39B-202ENST00000396172 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 PDE12Q6L8Q7 609 aaKnown RBP10.5□□□□□ -0.73
DDX39B-202ENST00000396172 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 C4orf50Q6ZRC1 276 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 IRF2BP2Q7Z5L9 587 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 LRRC8AQ8IWT6 810 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 CCDC170Q8IYT3 715 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 KLHL23Q8NBE8 558 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
DDX39B-202ENST00000396172 BCL7CQ8WUZ0 217 aaPredicted RBP10.5□□□□□ -0.73
DDX39B-202ENST00000396172 PBX4Q9BYU1 374 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms