RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 INHBEP58166 350 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 ZNF200P98182 395 aaPredicted RBP12.86□□□□□ -0.35
ITGB1-202ENST00000396033 CRHR2Q13324 411 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 SGO2Q562F6 1265 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 SNX27Q96L92 541 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 KATNAL1Q9BW62 490 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
ITGB1-202ENST00000396033 FNTAP49354 379 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 PTPN20Q4JDL3 420 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 C12orf50Q8NA57 414 aaPredicted RBP12.85□□□□□ -0.35
ITGB1-202ENST00000396033 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 PLEKHA5Q9HAU0 1116 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 HES2Q9Y543 173 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 TCRBV5S1A1TA0A578 114 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 TAP1Q03518 808 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 PCBP1Q15365 356 aaKnown RBP eCLIP12.85□□□□□ -0.35
ITGB1-202ENST00000396033 FSCN1Q16658 493 aaKnown RBP12.85□□□□□ -0.35
ITGB1-202ENST00000396033 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 C3orf20Q8ND61 904 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 MAIP1Q8WWC4 291 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 SH3GL2Q99962 352 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 CXCL16Q9H2A7 254 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 PIN4Q9Y237 131 aaKnown RBP12.85□□□□□ -0.35
ITGB1-202ENST00000396033 SNX24Q9Y343 169 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 Q9Y3F1 56 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 C17orf102A2RUQ5 167 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 GOLGA8SH3BPF8 625 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 PSEN1P49768 467 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 ADAM17P78536 824 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 MYO1EQ12965 1108 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 KATNAL2Q8IYT4 538 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 C1orf54Q8WWF1 131 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 FMO2Q99518 471 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 APOL6Q9BWW8 343 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 SYNCQ9H7C4 482 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 CYTH4Q9UIA0 394 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
ITGB1-202ENST00000396033 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 M0QYV0 167 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 PODXLO00592 558 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 FLT3P36888 993 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 KCNJ1P48048 391 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 ZFYVE27Q5T4F4 411 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 NXF3Q9H4D5 531 aaKnown RBP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 BARX2Q9UMQ3 279 aaPredicted RBP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 DERAQ9Y315 318 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 MICAL2O94851 1124 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 RALAP11233 206 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 AKR1A1P14550 325 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 NDST1P52848 882 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 ZNF252P-AS1Q0IIN9 211 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 SNX17Q15036 470 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 IQCKQ8N0W5 287 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 TMEM40Q8WWA1 233 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 ZMAT2Q96NC0 199 aaKnown RBP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 LRRC19Q9H756 370 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 KLHL11Q9NVR0 708 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 GOLGA6CA6NDK9 693 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 ECEL1O95672 775 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 GOLGA6DP0CG33 693 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 HSD17B3P37058 310 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 SNX1Q13596 522 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 GLRA4Q5JXX5 417 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 C7orf31Q8N865 590 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 HERPUD2Q9BSE4 406 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 GOLGA6AQ9NYA3 693 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 TUBGCP4Q9UGJ1 667 aa12.84□□□□□ -0.35
ITGB1-202ENST00000396033 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.84□□□□□ -0.35
ITGB1-202ENST00000396033 RECQL4O94761 1208 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 VDRP11473 427 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 AXLP30530 894 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 LMAN1P49257 510 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 OGDHQ02218 1023 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 BEST2Q8NFU1 509 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 EXD1Q8NHP7 514 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 ATG4AQ8WYN0 398 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 PLAAQ9Y263 795 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 PASKQ96RG2 1323 aa12.83□□□□□ -0.35
ITGB1-202ENST00000396033 F8VP50 259 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 TCF4P15884 667 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 CTGFP29279 349 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 PLTPP55058 493 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 PURAQ00577 322 aaKnown RBP12.83□□□□□ -0.36
ITGB1-202ENST00000396033 PPP1R7Q15435 360 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 TMC3Q7Z5M5 1100 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
ITGB1-202ENST00000396033 UBLCP1Q8WVY7 318 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms