RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PPM1LQ5SGD2 360 aa21.32■■□□□ 1
SNCA-203ENST00000394986 CES5AQ6NT32 575 aa21.32■■□□□ 1
SNCA-203ENST00000394986 GPR149Q86SP6 731 aa21.32■■□□□ 1
SNCA-203ENST00000394986 ATAD1Q8NBU5 361 aa21.32■■□□□ 1
SNCA-203ENST00000394986 IMPG2Q9BZV3 1241 aa21.32■■□□□ 1
SNCA-203ENST00000394986 DNAJC25Q9H1X3 360 aa21.32■■□□□ 1
SNCA-203ENST00000394986 PRRG1O14668 218 aa21.31■■□□□ 1
SNCA-203ENST00000394986 CCL16O15467 120 aa21.31■■□□□ 1
SNCA-203ENST00000394986 TACC1O75410 805 aa21.31■■□□□ 1
SNCA-203ENST00000394986 CCDC192P0DO97 292 aa21.31■■□□□ 1
SNCA-203ENST00000394986 ASPAP45381 313 aa21.31■■□□□ 1
SNCA-203ENST00000394986 PSMC1P62191 440 aaKnown RBP21.31■■□□□ 1
SNCA-203ENST00000394986 PUS10Q3MIT2 529 aaKnown RBP21.31■■□□□ 1
SNCA-203ENST00000394986 CMASQ8NFW8 434 aaPredicted RBP21.31■■□□□ 1
SNCA-203ENST00000394986 OR6B3Q8NGW1 331 aa21.31■■□□□ 1
SNCA-203ENST00000394986 SMG7Q92540 1137 aaKnown RBP21.31■■□□□ 1
SNCA-203ENST00000394986 TAF4BQ92750 862 aa21.31■■□□□ 1
SNCA-203ENST00000394986 ACBD6Q9BR61 282 aa21.31■■□□□ 1
SNCA-203ENST00000394986 SNX25Q9H3E2 840 aa21.31■■□□□ 1
SNCA-203ENST00000394986 RAB20Q9NX57 234 aa21.31■■□□□ 1
SNCA-203ENST00000394986 ZDHHC7Q9NXF8 308 aa21.31■■□□□ 1
SNCA-203ENST00000394986 SLC27A5Q9Y2P5 690 aa21.31■■□□□ 1
SNCA-203ENST00000394986 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.31■■□□□ 1
SNCA-203ENST00000394986 ATP2C2O75185 946 aa21.3■■□□□ 1
SNCA-203ENST00000394986 SOAT2O75908 522 aa21.3■■□□□ 1
SNCA-203ENST00000394986 TSPY1Q01534 308 aa21.3■■□□□ 1
SNCA-203ENST00000394986 DUSP4Q13115 394 aa21.3■■□□□ 1
SNCA-203ENST00000394986 CBX2Q14781 532 aaPredicted RBP21.3■■□□□ 1
SNCA-203ENST00000394986 INTS6LQ5JSJ4 861 aaKnown RBP21.3■■□□□ 1
SNCA-203ENST00000394986 CCDC149Q6ZUS6 474 aa21.3■■□□□ 1
SNCA-203ENST00000394986 TCEAL8Q8IYN2 117 aa21.3■■□□□ 1
SNCA-203ENST00000394986 SPATA18Q8TC71 538 aa21.3■■□□□ 1
SNCA-203ENST00000394986 NECAB3Q96P71 396 aaPredicted RBP21.3■■□□□ 1
SNCA-203ENST00000394986 PKMYT1Q99640 499 aa21.3■■□□□ 1
SNCA-203ENST00000394986 LPIN3Q9BQK8 851 aa21.3■■□□□ 1
SNCA-203ENST00000394986 SYT15Q9BQS2 421 aa21.3■■□□□ 1
SNCA-203ENST00000394986 PRKD2Q9BZL6 878 aa21.3■■□□□ 1
SNCA-203ENST00000394986 DPEP3Q9H4B8 488 aa21.3■■□□□ 1
SNCA-203ENST00000394986 POMKQ9H5K3 350 aa21.3■■□□□ 1
SNCA-203ENST00000394986 THAP9Q9H5L6 903 aa21.3■■□□□ 1
SNCA-203ENST00000394986 SAMSN1Q9NSI8 373 aaKnown RBP21.3■■□□□ 1
SNCA-203ENST00000394986 INSL5Q9Y5Q6 135 aa21.3■■□□□ 1
SNCA-203ENST00000394986 P4HA1P13674 534 aa21.29■■□□□ 1
SNCA-203ENST00000394986 GNL1P36915 607 aaPredicted RBP21.29■■□□□ 1
SNCA-203ENST00000394986 KCNH2Q12809 1159 aa21.29■■□□□ 1
SNCA-203ENST00000394986 CT47A1Q5JQC4 288 aaPredicted RBP21.29■■□□□ 1
SNCA-203ENST00000394986 DCP1BQ8IZD4 617 aaKnown RBP21.29■■□□□ 1
SNCA-203ENST00000394986 NIF3L1Q9GZT8 377 aa21.29■■□□□ 1
SNCA-203ENST00000394986 ABI2Q9NYB9 513 aaPredicted RBP21.29■■□□□ 1
SNCA-203ENST00000394986 GTF3C4Q9UKN8 822 aa21.29■■□□□ 1
SNCA-203ENST00000394986 COQ4Q9Y3A0 265 aa21.29■■□□□ 1
SNCA-203ENST00000394986 NFE2L3Q9Y4A8 694 aa21.29■■□□□ 1
SNCA-203ENST00000394986 YIPF1Q9Y548 306 aa21.29■■□□□ 1
SNCA-203ENST00000394986 SYCE3A1L190 88 aa21.29■■□□□ 1
SNCA-203ENST00000394986 MYBPHLA2RUH7 354 aa21.29■■□□□ 1
SNCA-203ENST00000394986 A8MXQ7 604 aa21.29■■□□□ 1
SNCA-203ENST00000394986 AFPP02771 609 aaKnown RBP21.29■■□□□ 1
SNCA-203ENST00000394986 SP100P23497 879 aaPredicted RBP21.29■■□□□ 1
SNCA-203ENST00000394986 PCSK1P29120 753 aa21.29■■□□□ 1
SNCA-203ENST00000394986 MTIF2P46199 727 aaKnown RBP21.29■■□□□ 1
SNCA-203ENST00000394986 TWF1Q12792 350 aa21.29■■□□□ 1
SNCA-203ENST00000394986 ORC1Q13415 861 aa21.29■■□□□ 1
SNCA-203ENST00000394986 UVSSAQ2YD98 709 aa21.29■■□□□ 1
SNCA-203ENST00000394986 ENOX1Q8TC92 643 aaKnown RBP21.29■■□□□ 1
SNCA-203ENST00000394986 TATDN2Q93075 761 aa21.29■■□□□ 1
SNCA-203ENST00000394986 RIPOR3Q96MK2 946 aa21.29■■□□□ 1
SNCA-203ENST00000394986 PIDD1Q9HB75 910 aa21.29■■□□□ 1
SNCA-203ENST00000394986 CRTAC1Q9NQ79 661 aa21.29■■□□□ 1
SNCA-203ENST00000394986 HMGXB4Q9UGU5 601 aa21.29■■□□□ 1
SNCA-203ENST00000394986 FAM50BQ9Y247 325 aa21.29■■□□□ 1
SNCA-203ENST00000394986 VCANP13611 3396 aa21.28■■□□□ 1
SNCA-203ENST00000394986 HNRNPA1P09651 372 aaKnown RBP eCLIP21.28■■□□□ 1
SNCA-203ENST00000394986 HOXA9P31269 272 aa21.28■■□□□ 1
SNCA-203ENST00000394986 MTHFRP42898 656 aa21.28■■□□□ 1
SNCA-203ENST00000394986 NTHL1P78549 312 aa21.28■■□□□ 1
SNCA-203ENST00000394986 LRMPQ12912 555 aa21.28■■□□□ 1
SNCA-203ENST00000394986 ANO6Q4KMQ2 910 aa21.28■■□□□ 1
SNCA-203ENST00000394986 ATAT1Q5SQI0 421 aa21.28■■□□□ 1
SNCA-203ENST00000394986 CCDC150Q8NCX0 1101 aa21.28■■□□□ 1
SNCA-203ENST00000394986 ADAMTS19Q8TE59 1207 aa21.28■■□□□ 1
SNCA-203ENST00000394986 SEPT5Q99719 369 aaPredicted RBP21.28■■□□□ 1
SNCA-203ENST00000394986 ARID3AQ99856 593 aa21.28■■□□□ 1
SNCA-203ENST00000394986 BCO2Q9BYV7 579 aa21.28■■□□□ 1
SNCA-203ENST00000394986 RHOBTB2Q9BYZ6 727 aa21.28■■□□□ 1
SNCA-203ENST00000394986 HCFC1R1Q9NWW0 138 aa21.28■■□□□ 1
SNCA-203ENST00000394986 CDH9Q9ULB4 789 aa21.28■■□□□ 1
SNCA-203ENST00000394986 PAPLNO95428 1278 aa21.27■■□□□ 1
SNCA-203ENST00000394986 LRG1P02750 347 aa21.27■■□□□ 1
SNCA-203ENST00000394986 CD58P19256 250 aa21.27■■□□□ 1
SNCA-203ENST00000394986 NFKBIBQ15653 356 aa21.27■■□□□ 1
SNCA-203ENST00000394986 MDH1BQ5I0G3 518 aa21.27■■□□□ 1
SNCA-203ENST00000394986 GRASPQ7Z6J2 395 aaPredicted RBP21.27■■□□□ 1
SNCA-203ENST00000394986 PCDHB5Q9Y5E4 795 aa21.27■■□□□ 1
SNCA-203ENST00000394986 KCNJ18B7U540 433 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 N4BP1O75113 896 aaKnown RBP21.26■□□□□ 0.99
SNCA-203ENST00000394986 FAM163BP0C2L3 166 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 NDST1P52848 882 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 KCNJ12Q14500 433 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 MGAT5BQ3V5L5 792 aa21.26■□□□□ 0.99
SNCA-203ENST00000394986 WDR44Q5JSH3 913 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms