RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 APRTP07741 180 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 NPTX2P47972 431 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 PTDSS1P48651 473 aaKnown RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 MMP14P50281 582 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 FKBP1AP62942 108 aaKnown RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 SATB1Q01826 763 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 ANGEL2Q5VTE6 544 aaKnown RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 TCP10LQ8TDR4 215 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 MRPL47Q9HD33 250 aaKnown RBP13.9□□□□□ -0.18
NFKB1-202ENST00000394820 SLC9A2Q9UBY0 812 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 SCN9AQ15858 1988 aa13.9□□□□□ -0.18
NFKB1-202ENST00000394820 DPPA5A6NC42 116 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
NFKB1-202ENST00000394820 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 GHRP10912 638 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 TCN1P20061 433 aaPredicted RBP13.89□□□□□ -0.19
NFKB1-202ENST00000394820 MFSD7Q6UXD7 560 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ARHGAP24Q8N264 748 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 CEP70Q8NHQ1 597 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ZBTB45Q96K62 511 aaPredicted RBP13.89□□□□□ -0.19
NFKB1-202ENST00000394820 CLPTM1LQ96KA5 538 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ZDHHC18Q9NUE0 388 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 GTF3C4Q9UKN8 822 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 F8VP50 259 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 PFDN1O60925 122 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 MYL2P10916 166 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 RPL7AP62424 266 aaKnown RBP13.89□□□□□ -0.19
NFKB1-202ENST00000394820 PDE1CQ14123 709 aaPredicted RBP13.89□□□□□ -0.19
NFKB1-202ENST00000394820 BBOF1Q8ND07 529 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 CKAP2Q8WWK9 683 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 CLEC4DQ8WXI8 215 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 TLCD1Q96CP7 247 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ZNF570Q96NI8 536 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 PCMTD2Q9NV79 361 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ZNF536O15090 1300 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 DGKIO75912 1065 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 HLA-DRAP01903 254 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 BMT2Q1RMZ1 405 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 SPATA24Q86W54 205 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 GLIS1Q8NBF1 620 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 TARS2Q9BW92 718 aaKnown RBP13.89□□□□□ -0.19
NFKB1-202ENST00000394820 ACSS2Q9NR19 701 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 TBC1D22BQ9NU19 505 aa13.89□□□□□ -0.19
NFKB1-202ENST00000394820 PPP1R12AO14974 1030 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-202ENST00000394820 SLC8A3P57103 927 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 TAS2R40P59535 323 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 NFX1Q12986 1120 aaKnown RBP13.88□□□□□ -0.19
NFKB1-202ENST00000394820 SLC1A5Q15758 541 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 RFWD3Q6PCD5 774 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 LRRC43Q8N309 656 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 RNF148Q8N7C7 305 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 FIZ1Q96SL8 496 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 PCDHA10Q9Y5I2 948 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 A0A0A6YYK5 440 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-202ENST00000394820 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 ARL4CP56559 192 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 DEUP1Q05D60 604 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 OR6B2Q6IFH4 312 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 ACAD10Q6JQN1 1059 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 MIS18BP1Q6P0N0 1132 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 FAM13CQ8NE31 585 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 USP6NLQ92738 828 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 MAGEB18Q96M61 343 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 NLRP4Q96MN2 994 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 KREMEN1Q96MU8 473 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 ROPN1BQ9BZX4 212 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-202ENST00000394820 ROPN1Q9HAT0 212 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-202ENST00000394820 TMEM59LQ9UK28 342 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 ATRNL1Q5VV63 1379 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 NEMP1O14524 444 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 USP1O94782 785 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 CHRNB2P17787 502 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 GTF2H1P32780 548 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 BAG6P46379 1132 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 JAM2P57087 298 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 TMED1Q13445 227 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 RASSF3Q86WH2 238 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 NCAPG2Q86XI2 1143 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 NUDCD3Q8IVD9 361 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 FBXO36Q8NEA4 188 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 UCMAQ8WVF2 138 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 BSNDQ8WZ55 320 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 DCLK3Q9C098 648 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-202ENST00000394820 MANSC1Q9H8J5 431 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 BATF3Q9NR55 127 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 RAB6BQ9NRW1 208 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 IVNS1ABPQ9Y6Y0 642 aa13.88□□□□□ -0.19
NFKB1-202ENST00000394820 UBR3Q6ZT12 1888 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms