RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 MTERF2Q49AM1 385 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 PCGF5Q86SE9 256 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 SULF1Q8IWU6 871 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 TEX9Q8N6V9 391 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 RBBP8NLQ8NC74 664 aaPredicted RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 TAS1R2Q8TE23 839 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 CKAP2Q8WWK9 683 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 FAF2Q96CS3 445 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 SCYL1Q96KG9 808 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 MAGEB18Q96M61 343 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 NDNQ99608 321 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 EPAS1Q99814 870 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 EDEM3Q9BZQ6 932 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 GALNT8Q9NY28 637 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 MTMR4Q9NYA4 1195 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 DNPEPQ9ULA0 475 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 PCDHAC2Q9Y5I4 1007 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 DICER1Q9UPY3 1922 aaKnown RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 DENND3A2RUS2 1198 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 PDXKO00764 312 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 TBC1D12O60347 775 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 DESP17661 470 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 EEF1B2P24534 225 aaKnown RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 NFIAQ12857 509 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 PTK7Q13308 1070 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 SEPT6Q14141 434 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 CNGA3Q16281 694 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 EMC1Q8N766 993 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 LRRC57Q8N9N7 239 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 KCTD6Q8NC69 237 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 RUBCNQ92622 972 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 TMA16Q96EY4 203 aaKnown RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 NSL1Q96IY1 281 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 CEP41Q9BYV8 373 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 MICAL3Q7RTP6 2002 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 ZNF646O15015 1829 aaPredicted RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 FAM86B1E9PN63 330 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 FCHO1O14526 889 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 STAM2O75886 525 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 DDNO94850 711 aaPredicted RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 VIL1P09327 827 aaKnown RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 CETPP11597 493 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 HSPA6P17066 643 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 TAC1P20366 129 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 RCAN1P53805 252 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 BNIP1Q12981 228 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 KRT81Q14533 505 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 C16orf46Q6P387 395 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 ZDHHC24Q6UX98 284 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 OTOAQ7RTW8 1153 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 CRLF3Q8IUI8 442 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 GSTCDQ8NEC7 633 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 CEP170P1Q96L14 293 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 LRGUKQ96M69 825 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 A1CFQ9NQ94 594 aaKnown RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 KMT5AQ9NQR1 393 aa9.26□□□□□ -0.93
RTN4-206ENST00000394611 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
RTN4-206ENST00000394611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.26□□□□□ -0.935e-6■□□□□ 9.7
RTN4-206ENST00000394611 TRIM49D1C9J1S8 452 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 FAM155BO75949 473 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 FAM200BP0CF97 657 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ZNF200P98182 395 aaPredicted RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 PPP3CAQ08209 521 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ASTE1Q2TB18 679 aaPredicted RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 HABP4Q5JVS0 413 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 ZNF354CQ86Y25 554 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ZNF75CPQ92670 426 aaPredicted RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 WNT8AQ9H1J5 351 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 CAAP1Q9H8G2 361 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 MAN1C1Q9NR34 630 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 HSPBP1Q9NZL4 362 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 RBMX2Q9Y388 322 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 DCAF8L1A6NGE4 600 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 F5H6K3 240 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 RTN2O75298 545 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 PSMA2P25787 234 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 SESN2P58004 480 aaPredicted RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 HIC1Q14526 733 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 PPP4R3CPQ6ZMV5 832 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 KDELC2Q7Z4H8 507 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 FBXO36Q8NEA4 188 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 DIS3LQ8TF46 1054 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 SERPINB12Q96P63 405 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 NUF2Q9BZD4 464 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 FBXO28Q9NVF7 368 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ETNK2Q9NVF9 386 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 ADA2Q9NZK5 511 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 SLC12A4Q9UP95 1085 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 FNDC3AQ9Y2H6 1198 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 E9PBE3 544 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 KLHL41O60662 606 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 AVILO75366 819 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 TPBGLP0DKB5 382 aa9.25□□□□□ -0.93
RTN4-206ENST00000394611 PCP11498 1178 aaKnown RBP9.25□□□□□ -0.93
RTN4-206ENST00000394611 ITIH2P19823 946 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms