RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 GDAP1L1Q96MZ0 367 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 CPXM1Q96SM3 734 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 FUT8Q9BYC5 575 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 LHX5Q9H2C1 402 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 PARVAQ9NVD7 372 aa20.21■□□□□ 0.83
CLDND1-203ENST00000394181 TCRBV7S2A1N4TA0A589 114 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 ESYT3A0FGR9 886 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 INHAP05111 366 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 GHRP10912 638 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 MAP2K2P36507 400 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 OGDHQ02218 1023 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 LHX8Q68G74 356 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 ZNF784Q8NCA9 323 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-203ENST00000394181 ZNF296Q8WUU4 475 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-203ENST00000394181 ZNF518BQ9C0D4 1074 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 FAM105AQ9NUU6 356 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 STIM2Q9P246 746 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.2■□□□□ 0.82
CLDND1-203ENST00000394181 RALGAPA2Q2PPJ7 1873 aa20.2■□□□□ 0.82
CLDND1-203ENST00000394181 MED7O43513 233 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 MGEA5O60502 916 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 PROSCO94903 275 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 IBSPP21815 317 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-203ENST00000394181 CTNNA2P26232 953 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 TAS2R40P59535 323 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 ZNF252P-AS1Q0IIN9 211 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 RNF180Q86T96 592 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 ACOT1Q86TX2 421 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 RPAINQ86UA6 219 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 LRRC52Q8N7C0 313 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 GSTCDQ8NEC7 633 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 MCEEQ96PE7 176 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 NT5C1AQ9BXI3 368 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 MRPL47Q9HD33 250 aaKnown RBP20.19■□□□□ 0.82
CLDND1-203ENST00000394181 PADI3Q9ULW8 664 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 L1RE1Q9UN81 338 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 USTQ9Y2C2 406 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 CCDC66A2RUB6 948 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 TMEM191CA6NGB0 347 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 SART1O43290 800 aaKnown RBP20.19■□□□□ 0.82
CLDND1-203ENST00000394181 CALB1P05937 261 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 TCF4P15884 667 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 CCDC70Q6NSX1 233 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 DPEP3Q9H4B8 488 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 MIOSQ9NXC5 875 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 CEP83Q9Y592 693 aa20.19■□□□□ 0.82
CLDND1-203ENST00000394181 GOLGA8SH3BPF8 625 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 M0QYV0 167 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 PIK3R2O00459 728 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 ERBB2P04626 1255 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 FGFR1P11362 822 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 VDRP11473 427 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 MLH1P40692 756 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 GPD2P43304 727 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 CNGA2Q16280 664 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 SGO2Q562F6 1265 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 FBXO47Q5MNV8 452 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 PPP1R15BQ5SWA1 713 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 PXYLP1Q8TE99 480 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 GAD1Q99259 594 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 AMACRQ9UHK6 382 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 SCINQ9Y6U3 715 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 HEXIM1O94992 359 aaKnown RBP20.18■□□□□ 0.82
CLDND1-203ENST00000394181 CD4P01730 458 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 LMO2P25791 158 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 GUCY2DQ02846 1103 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 LPIN1Q14693 890 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 TRIM71Q2Q1W2 868 aaKnown RBP20.18■□□□□ 0.82
CLDND1-203ENST00000394181 GLE1Q53GS7 698 aaKnown RBP20.18■□□□□ 0.82
CLDND1-203ENST00000394181 DNAJC24Q6P3W2 148 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 KBTBD7Q8WVZ9 684 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 PPP1R10Q96QC0 940 aaKnown RBP20.18■□□□□ 0.82
CLDND1-203ENST00000394181 EPB41L5Q9HCM4 733 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 FAM49BQ9NUQ9 324 aa20.18■□□□□ 0.82
CLDND1-203ENST00000394181 KPNA7A9QM74 516 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 RRP9O43818 475 aaKnown RBP20.17■□□□□ 0.82
CLDND1-203ENST00000394181 ERLIN1O75477 346 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 TUBBP07437 444 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 PFKMP08237 780 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 PDGFRBP09619 1106 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 CDR1P51861 262 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 RWDD2BP57060 319 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 PPP1R26Q5T8A7 1209 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-203ENST00000394181 OR6B3Q8NGW1 331 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 FAM53CQ9NYF3 392 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 TSPAN16Q9UKR8 245 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 F8VP50 259 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 TULP2O00295 520 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 PPP1R2P3Q6NXS1 205 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 JOSD2Q8TAC2 188 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 DDX27Q96GQ7 796 aaKnown RBP20.17■□□□□ 0.82
CLDND1-203ENST00000394181 HERPUD2Q9BSE4 406 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 NOD1Q9Y239 953 aa20.17■□□□□ 0.82
CLDND1-203ENST00000394181 RFC1P35251 1148 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-203ENST00000394181 SLC1A1P43005 524 aa20.16■□□□□ 0.82
CLDND1-203ENST00000394181 CARSP49589 748 aaKnown RBP20.16■□□□□ 0.82
CLDND1-203ENST00000394181 LILRA4P59901 499 aa20.16■□□□□ 0.82
CLDND1-203ENST00000394181 PSMC1P62191 440 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms