RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 MTO1Q9Y2Z2 717 aaKnown RBP12.4□□□□□ -0.42
R3HDM2-203ENST00000393811 CST8O60676 142 aa12.4□□□□□ -0.42
R3HDM2-203ENST00000393811 IVDP26440 423 aa12.4□□□□□ -0.42
R3HDM2-203ENST00000393811 SLC24A2Q9UI40 661 aa12.4□□□□□ -0.42
R3HDM2-203ENST00000393811 XPO7Q9UIA9 1087 aaKnown RBP12.4□□□□□ -0.42
R3HDM2-203ENST00000393811 C2CD2LO14523 706 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 MCF2LO15068 1137 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 PSMG1O95456 288 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 KRT19P08727 400 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 SP100P23497 879 aaPredicted RBP12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 RANBP1P43487 201 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 CYP24A1Q07973 514 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 CUL3Q13618 768 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 CASC4Q6P4E1 433 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 GMCL1P1Q8NEA9 526 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 C10orf82Q8WW14 230 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 CADM1Q9BY67 442 aaKnown RBP12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 SAR1AQ9NR31 198 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.43
R3HDM2-203ENST00000393811 MAGEA13PA6NCF6 341 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 WDR64B1ANS9 1081 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 FCHO1O14526 889 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 LIASO43766 372 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 YY1P25490 414 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 GPC3P51654 580 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 RPL7AP62424 266 aaKnown RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 AP2B1P63010 937 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 RASA2Q15283 850 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SMAD1Q15797 465 aaKnown RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SEZ6Q53EL9 994 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 LRRC23Q53EV4 343 aaPredicted RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 CYP4A22Q5TCH4 519 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 VCX3BQ9H321 246 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 CYP4F11Q9HBI6 524 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 RAVER2Q9HCJ3 691 aaKnown RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SLC9A2Q9UBY0 812 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 LRRC42Q9Y546 428 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 F8VP50 259 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 ABHD2P08910 425 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 TNFAIP8L3Q5GJ75 292 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 IZUMO2Q6UXV1 221 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SPOCD1Q6ZMY3 1216 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SLCO2A1Q92959 643 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 MTBPQ96DY7 904 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 PIDD1Q9HB75 910 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 NXF1Q9UBU9 619 aaKnown RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 LAMB1P07942 1786 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 KIAA1551Q9HCM1 1747 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 PYGBP11216 843 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 GM2AP17900 193 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 ITGB5P18084 799 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 CDCA2Q69YH5 1023 aaPredicted RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 CRLF3Q8IUI8 442 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 ACTL9Q8TC94 416 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SLC26A7Q8TE54 656 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 SLC7A6OSQ96CW6 309 aaPredicted RBP12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 ETAA1Q9NY74 926 aa12.39□□□□□ -0.43
R3HDM2-203ENST00000393811 GSC2O15499 205 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 TCEA3O75764 348 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 RNF8O76064 485 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 FDX1P10109 184 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 MUTP22033 750 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 OTUD4Q01804 1114 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 MAMLD1Q13495 774 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 RASSF3Q86WH2 238 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 NUDCD3Q8IVD9 361 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 KATNAL2Q8IYT4 538 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 TMEM35BQ8NCS4 154 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 ALKBH8Q96BT7 664 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 RMDN3Q96TC7 470 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 MSTO1Q9BUK6 570 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 SHCBP1LQ9BZQ2 653 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 FAM237BA0A1B0GVD1 139 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 NFIBO00712 420 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 PRPF4O43172 522 aaKnown RBP eCLIP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 VCPP55072 806 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 GTF2BQ00403 316 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 GRAMD1BQ3KR37 738 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 ACSBG2Q5FVE4 666 aa12.38□□□□□ -0.43
R3HDM2-203ENST00000393811 FAM182AQ5T1J6 154 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms