RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 KLK14Q9P0G3 267 aa23.52■■□□□ 1.36
HMGA2-203ENST00000393578 IP6K2Q9UHH9 426 aa23.52■■□□□ 1.36
HMGA2-203ENST00000393578 SNX9Q9Y5X1 595 aa23.52■■□□□ 1.36
HMGA2-203ENST00000393578 PDCD11Q14690 1871 aaKnown RBP23.52■■□□□ 1.36
HMGA2-203ENST00000393578 PPEF2O14830 753 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 RPS6KA5O75582 802 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 SGO2Q562F6 1265 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 C3orf20Q8ND61 904 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 WNT8BQ93098 351 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 NR2E1Q9Y466 385 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 O00370 1275 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 PLA2G4AP47712 749 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 PPP1R15BQ5SWA1 713 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 MAP3K21Q5TCX8 1036 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 GSPT2Q8IYD1 628 aaKnown RBP23.51■■□□□ 1.35
HMGA2-203ENST00000393578 ST3GAL5Q9UNP4 418 aa23.51■■□□□ 1.35
HMGA2-203ENST00000393578 SCN1AP35498 2009 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 PIRO00625 290 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 TRPA1O75762 1119 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 MICAL2O94851 1124 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 CHRNA1P02708 482 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 MYCNP04198 464 aaPredicted RBP23.5■■□□□ 1.35
HMGA2-203ENST00000393578 CYP3A5P20815 502 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 EPHB4P54760 987 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 RPL7AP62424 266 aaKnown RBP23.5■■□□□ 1.35
HMGA2-203ENST00000393578 PTPN20Q4JDL3 420 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 CHST12Q9NRB3 414 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 AMACRQ9UHK6 382 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 CYTH4Q9UIA0 394 aa23.5■■□□□ 1.35
HMGA2-203ENST00000393578 A0A0U1RQG5 324 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 PSTPIP1O43586 416 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 PNPLA4P41247 253 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 STILQ15468 1287 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 FBXO47Q5MNV8 452 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 EMBQ6PCB8 327 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 DCUN1D2Q6PH85 259 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 ADAT2Q7Z6V5 191 aaKnown RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 SLC13A5Q86YT5 568 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 RHOT1Q8IXI2 618 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 CD99L2Q8TCZ2 262 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 GRIN2DO15399 1336 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 ZSCAN5CA6NGD5 496 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 GJB6O95452 261 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 CTSHP09668 335 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 TNNT3P45378 269 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 GSCP56915 257 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 MGAT3Q09327 533 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 CYP4A22Q5TCH4 519 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 EIF1ADQ8N9N8 165 aaKnown RBP23.49■■□□□ 1.35
HMGA2-203ENST00000393578 ARRDC4Q8NCT1 418 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 C18orf8Q96DM3 657 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 ZNF560Q96MR9 790 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 MCEEQ96PE7 176 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 VIPAS39Q9H9C1 493 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 RNF19AQ9NV58 838 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 WDR35Q9P2L0 1181 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 MTUS1Q9ULD2 1270 aa23.49■■□□□ 1.35
HMGA2-203ENST00000393578 M0QYV0 167 aa23.48■■□□□ 1.35
HMGA2-203ENST00000393578 PAK2Q13177 524 aa23.48■■□□□ 1.35
HMGA2-203ENST00000393578 PTGISQ16647 500 aa23.48■■□□□ 1.35
HMGA2-203ENST00000393578 LCLAT1Q6UWP7 414 aa23.48■■□□□ 1.35
HMGA2-203ENST00000393578 DDX27Q96GQ7 796 aaKnown RBP23.48■■□□□ 1.35
HMGA2-203ENST00000393578 MRPL45Q9BRJ2 306 aaKnown RBP23.48■■□□□ 1.35
HMGA2-203ENST00000393578 PLEKHA4Q9H4M7 779 aa23.48■■□□□ 1.35
HMGA2-203ENST00000393578 ERVK-5Q9HDB9 667 aa23.48■■□□□ 1.35
HMGA2-203ENST00000393578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.48■■□□□ 1.355e-9■□□□□ 10.9
HMGA2-203ENST00000393578 DDX20Q9UHI6 824 aaKnown RBP23.48■■□□□ 1.35
HMGA2-203ENST00000393578 ESYT3A0FGR9 886 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 BHMG1C9JSJ3 638 aaPredicted RBP23.47■■□□□ 1.35
HMGA2-203ENST00000393578 GPD2P43304 727 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 CARSP49589 748 aaKnown RBP23.47■■□□□ 1.35
HMGA2-203ENST00000393578 CBX1P83916 185 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 NFX1Q12986 1120 aaKnown RBP23.47■■□□□ 1.35
HMGA2-203ENST00000393578 RNF180Q86T96 592 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 UNC93AQ86WB7 457 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 CASKIN2Q8WXE0 1202 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 IFT81Q8WYA0 676 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.47■■□□□ 1.351e-7■■□□□ 11.4
HMGA2-203ENST00000393578 CPXM1Q96SM3 734 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 GDAP2Q9NXN4 497 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 THSD7BQ9C0I4 1608 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 GPR182O15218 404 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 PHF2O75151 1096 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 GNRH1P01148 92 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 SOWAHAQ2M3V2 549 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 PRELID2Q8N945 189 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 SYNCQ9H7C4 482 aa23.47■■□□□ 1.35
HMGA2-203ENST00000393578 SIGLEC16A6NMB1 481 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 KPNA7A9QM74 516 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 CABYRO75952 493 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 CHRNA3P32297 505 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 THPOP40225 353 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 GABRB2P47870 512 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 APLP1P51693 650 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 CUL1Q13616 776 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 DHX34Q14147 1143 aaKnown RBP23.46■■□□□ 1.35
HMGA2-203ENST00000393578 PIGHQ14442 188 aaPredicted RBP23.46■■□□□ 1.35
HMGA2-203ENST00000393578 ZNF268Q14587 947 aaPredicted RBP23.46■■□□□ 1.35
HMGA2-203ENST00000393578 KATNAL2Q8IYT4 538 aa23.46■■□□□ 1.35
HMGA2-203ENST00000393578 HACE1Q8IYU2 909 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms