RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CNGA2Q16280 664 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SOWAHAQ2M3V2 549 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 LRRC8DQ7L1W4 858 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 WDTC1Q8N5D0 677 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 C12orf29Q8N999 325 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 APPL2Q8NEU8 664 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 UBA3Q8TBC4 463 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 RABGGTAQ92696 567 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 HES6Q96HZ4 224 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 RPGRIP1Q96KN7 1286 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 EPC1Q9H2F5 836 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 MRPL47Q9HD33 250 aaKnown RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 PARVAQ9NVD7 372 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 CACNG4Q9UBN1 327 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 KIAA1257Q9ULG3 409 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SCINQ9Y6U3 715 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 CASTOR2A6NHX0 329 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 MYO1FO00160 1098 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 GJB6O95452 261 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 POMCP01189 267 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 SELPP16109 830 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 LRPAP1P30533 357 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 CDK7P50613 346 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
TDP1-203ENST00000393454 TUBB4BP68371 445 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 RBM10P98175 930 aaKnown RBP9.16□□□□□ -0.94
TDP1-203ENST00000393454 BFSP2Q13515 415 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 MBTPS1Q14703 1052 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 CYP4A22Q5TCH4 519 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 ECHDC2Q86YB7 292 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 UBL4BQ8N7F7 174 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 NOA1Q8NC60 698 aaKnown RBP9.16□□□□□ -0.94
TDP1-203ENST00000393454 MSANTD4Q8NCY6 345 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 GSTCDQ8NEC7 633 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 SEZ6LQ9BYH1 1024 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 DNAI2Q9GZS0 605 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 LHX5Q9H2C1 402 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 FAM49BQ9NUQ9 324 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 RNF216Q9NWF9 866 aaPredicted RBP9.16□□□□□ -0.94
TDP1-203ENST00000393454 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 RNF14Q9UBS8 474 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 OGDHLQ9ULD0 1010 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.16□□□□□ -0.94
TDP1-203ENST00000393454 GOLGA8SH3BPF8 625 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 O00370 1275 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 PODXLO00592 558 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 CYB561D2O14569 222 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 CDH5P33151 784 aaPredicted RBP9.16□□□□□ -0.94
TDP1-203ENST00000393454 CLCNKBP51801 687 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 PTP4A2Q12974 167 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 MAMLD1Q13495 774 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 GOLGA7BQ2TAP0 167 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 DNAJC24Q6P3W2 148 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 DCUN1D2Q6PH85 259 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 DSTYKQ6XUX3 929 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 UNC93AQ86WB7 457 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 FAM126BQ8IXS8 530 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 ADGRF2Q8IZF7 708 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
TDP1-203ENST00000393454 TRIM7Q9C029 511 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 ST7Q9NRC1 585 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 RGS18Q9NS28 235 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 TSPAN16Q9UKR8 245 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 L1RE1Q9UN81 338 aa9.16□□□□□ -0.94
TDP1-203ENST00000393454 MIF4GDA9UHW6 222 aaKnown RBP9.15□□□□□ -0.94
TDP1-203ENST00000393454 CES2O00748 559 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 DDX3YO15523 660 aaKnown RBP9.15□□□□□ -0.94
TDP1-203ENST00000393454 HCRTO43612 131 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 FGFR1P11362 822 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 LMO2P25791 158 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 SSR1P43307 286 aaKnown RBP9.15□□□□□ -0.94
TDP1-203ENST00000393454 PSMC1P62191 440 aaKnown RBP9.15□□□□□ -0.94
TDP1-203ENST00000393454 STILQ15468 1287 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
TDP1-203ENST00000393454 PLEKHA7Q6IQ23 1121 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 CCDC70Q6NSX1 233 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 LCLAT1Q6UWP7 414 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 RTN4RL1Q86UN2 441 aaPredicted RBP9.15□□□□□ -0.94
TDP1-203ENST00000393454 CPNE8Q86YQ8 564 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 SPATA4Q8NEY3 305 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 FEZF2Q8TBJ5 459 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 KBTBD7Q8WVZ9 684 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 ANKRD7Q92527 254 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 C18orf8Q96DM3 657 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 LPIN3Q9BQK8 851 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 WNT8AQ9H1J5 351 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 DPEP3Q9H4B8 488 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 HESX1Q9UBX0 185 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 CYTH4Q9UIA0 394 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 USTQ9Y2C2 406 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 NME7Q9Y5B8 376 aa9.15□□□□□ -0.94
TDP1-203ENST00000393454 TDRD15B5MCY1 1934 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 IGFBP6P24592 240 aaPredicted RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 ADORA2BP29275 332 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms