RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FOSL2P15408 326 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 IGFBP4P22692 258 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 KIF5AQ12840 1032 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 ZNF699Q32M78 642 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 NT5DC4Q86YG4 428 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 C1orf127Q8N9H9 656 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 LNX1Q8TBB1 728 aaPredicted RBP14.49□□□□□ -0.09
PTN-202ENST00000393083 RABGGTAQ92696 567 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 C18orf25Q96B23 403 aaPredicted RBP14.49□□□□□ -0.09
PTN-202ENST00000393083 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 TSPAN18Q96SJ8 248 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 GOLGA2P5Q9HBQ8 144 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 SLC38A7Q9NVC3 462 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 DNAI1Q9UI46 699 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 GUCA1BQ9UMX6 200 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 STXBP5LQ9Y2K9 1186 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 PRG3Q9Y2Y8 225 aaPredicted RBP14.49□□□□□ -0.09
PTN-202ENST00000393083 C2CD2Q9Y426 696 aa14.49□□□□□ -0.09
PTN-202ENST00000393083 PLXNA4Q9HCM2 1894 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTN-202ENST00000393083 CYP26A1O43174 497 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 ITGB3P05106 788 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 IGFBP6P24592 240 aaPredicted RBP14.48□□□□□ -0.09
PTN-202ENST00000393083 PDE6CP51160 858 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 KRT17Q04695 432 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 PTPROQ16827 1216 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 UPP1Q16831 310 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 SGSM1Q2NKQ1 1148 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 CD300LGQ6UXG3 332 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 DDX53Q86TM3 631 aaKnown RBP14.48□□□□□ -0.09
PTN-202ENST00000393083 TMEM130Q8N3G9 435 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 KIF18AQ8NI77 898 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 OLIG1Q8TAK6 271 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 EPS8L1Q8TE68 723 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 SLC20A1Q8WUM9 679 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 TMEM169Q96HH4 297 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 AGPAT1Q99943 283 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 SYT11Q9BT88 431 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 COLEC11Q9BWP8 271 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
PTN-202ENST00000393083 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 LACRTQ9GZZ8 138 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 SEPT11Q9NVA2 429 aaKnown RBP14.48□□□□□ -0.09
PTN-202ENST00000393083 SIX4Q9UIU6 781 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 DERAQ9Y315 318 aa14.48□□□□□ -0.09
PTN-202ENST00000393083 FSCN2O14926 492 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 PJA2O43164 708 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 TNFAIP3P21580 790 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 IRS1P35568 1242 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 CLCNKBP51801 687 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 ERVFC1P60507 584 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 C10orf76Q5T2E6 689 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 SLC47A2Q86VL8 602 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 GLYCTKQ8IVS8 523 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 RNF168Q8IYW5 571 aaPredicted RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 TAF4BQ92750 862 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 UROC1Q96N76 676 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 TUBGCP4Q9UGJ1 667 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 PUF60Q9UHX1 559 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 NAGPAQ9UK23 515 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 ITGA11Q9UKX5 1188 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 NENFQ9UMX5 172 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 R3HCC1Q9Y3T6 440 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 PRRC2BQ5JSZ5 2229 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 EYSQ5T1H1 3165 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 TMEM189-UBE2V1I3L0A0 370 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 KIF4AO95239 1232 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 CYP3A5P20815 502 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 POLR2BP30876 1174 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 RPL9P32969 192 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 GUCY2FP51841 1108 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 ZNF569Q5MCW4 686 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 ALKBH5Q6P6C2 394 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 DCLRE1AQ6PJP8 1040 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 SCARA5Q6ZMJ2 495 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 NOP9Q86U38 636 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 SLC30A5Q8TAD4 765 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 DDX27Q96GQ7 796 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 WDR24Q96S15 920 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 XYLT2Q9H1B5 865 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 TLR9Q9NR96 1032 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 DPP3Q9NY33 737 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 NOCTQ9UK39 431 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 UBQLN1Q9UMX0 589 aaKnown RBP14.47□□□□□ -0.09
PTN-202ENST00000393083 PCDHB4Q9Y5E5 795 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 ATP8B3O60423 1300 aa14.47□□□□□ -0.09
PTN-202ENST00000393083 MACROD2A1Z1Q3 448 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 CYP11B1P15538 503 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 ACO1P21399 889 aaKnown RBP14.46□□□□□ -0.09
PTN-202ENST00000393083 LRPAP1P30533 357 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 CASQ1P31415 396 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 ZNF667Q5HYK9 610 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 TAF3Q5VWG9 929 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 TAS1R1Q7RTX1 841 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 VPS52Q8N1B4 723 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 SLC35F6Q8N357 371 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 UBR7Q8N806 425 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 C3orf58Q8NDZ4 430 aa14.46□□□□□ -0.09
PTN-202ENST00000393083 SECISBP2LQ93073 1101 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms