RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 CALML6Q8TD86 181 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 CCT7Q99832 543 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 RUSC1Q9BVN2 902 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 PSTPIP1O43586 416 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 GZMAP12544 262 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 BRD2P25440 801 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 CYLC2Q14093 348 aaPredicted RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 RCN1Q15293 331 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 THEMIS2Q5TEJ8 643 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 C17orf75Q9HAS0 396 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 MAGEB2O15479 319 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 CASP4P49662 377 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 ATF7IP2Q5U623 682 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 CYGBQ8WWM9 190 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 HIC2Q96JB3 615 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 HAO1Q9UJM8 370 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 ADGRB3O60242 1522 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 NDUFS3O75489 264 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 GLI1P08151 1106 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 PTGER2P43116 358 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 ACADSBP45954 432 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 CAVIN3Q969G5 261 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 CDC42EP4Q9H3Q1 356 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 TRIM45Q9H8W5 580 aaPredicted RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 METTL5Q9NRN9 209 aaKnown RBP13.69□□□□□ -0.22
LCA5-202ENST00000392959 WHRNQ9P202 907 aa13.69□□□□□ -0.22
LCA5-202ENST00000392959 IQSEC2Q5JU85 1478 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 MTSS1O43312 755 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 MED24O75448 989 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 DGKIO75912 1065 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 KRT16P08779 473 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 CYP4A22Q5TCH4 519 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 UBA3Q8TBC4 463 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 MAGEB18Q96M61 343 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.68□□□□□ -0.22
LCA5-202ENST00000392959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.22
LCA5-202ENST00000392959 PDP2Q9P2J9 529 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 SLC39A10Q9ULF5 831 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 SYNDIG1LA6NDD5 238 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 PJA2O43164 708 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 SGPL1O95470 568 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 KCNMA1Q12791 1236 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 CUL2Q13617 745 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 DMC1Q14565 340 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 NTRK3Q16288 839 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 PATL1Q86TB9 770 aaKnown RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 RFWD2Q8NHY2 731 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 INPP5DQ92835 1189 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 ACSF2Q96CM8 615 aaPredicted RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 TKFCQ3LXA3 575 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 DCAF6Q58WW2 860 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 SPDYAQ5MJ70 313 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 MEI1Q5TIA1 1274 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 FAM151AQ8WW52 585 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 AGXT2Q9BYV1 514 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 SHCBP1LQ9BZQ2 653 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 PRMT7Q9NVM4 692 aaPredicted RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 GID8Q9NWU2 228 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 RAB21Q9UL25 225 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 MRPS15P82914 257 aaKnown RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 BTKQ06187 659 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 LAMB3Q13751 1172 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 LAYNQ6UX15 382 aa13.68□□□□□ -0.22
LCA5-202ENST00000392959 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
LCA5-202ENST00000392959 SALL3Q9BXA9 1300 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 MAGEA13PA6NCF6 341 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 O00370 1275 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 HIST1H2AGP0C0S8 130 aaPredicted RBP13.67□□□□□ -0.22
LCA5-202ENST00000392959 HIST1H2ADP20671 130 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 GRIK1P39086 918 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 AASDHQ4L235 1098 aaPredicted RBP13.67□□□□□ -0.22
LCA5-202ENST00000392959 EFHC1Q5JVL4 640 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 FAXCQ5TGI0 409 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 IER5Q5VY09 327 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 NAPEPLDQ6IQ20 393 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 XRRA1Q6P2D8 792 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 ZNF571Q7Z3V5 609 aaPredicted RBP13.67□□□□□ -0.22
LCA5-202ENST00000392959 ADCK1Q86TW2 530 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 CBWD2Q8IUF1 395 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 SPATA2LQ8IUW3 424 aaPredicted RBP13.67□□□□□ -0.22
LCA5-202ENST00000392959 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 HIST1H2AHQ96KK5 128 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 HIST1H2AJQ99878 128 aa13.67□□□□□ -0.22
LCA5-202ENST00000392959 H2AFJQ9BTM1 129 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms