RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TCP11X2Q5H9J9 407 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CBWD3Q5JTY5 395 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CBWD5Q5RIA9 395 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 SCARA3Q6AZY7 606 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ANKRD54Q6NXT1 300 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 RSPO2Q6UXX9 243 aaPredicted RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CCDC149Q6ZUS6 474 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 C11orf57Q6ZUT1 292 aaPredicted RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 UNC93AQ86WB7 457 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 PALB2Q86YC2 1186 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CREBRFQ8IUR6 639 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 SPNS2Q8IVW8 549 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ADGRF2Q8IZF7 708 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 TMEM130Q8N3G9 435 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 KREMEN2Q8NCW0 462 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 EHBP1Q8NDI1 1231 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CMASQ8NFW8 434 aaPredicted RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ATXN2LQ8WWM7 1075 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 MSLNLQ96KJ4 702 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 FAM84AQ96KN4 292 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 FAM81BQ96LP2 452 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 TUBGCP2Q9BSJ2 902 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 FUCA2Q9BTY2 467 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ZCWPW1Q9H0M4 648 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 DNAJC25Q9H1X3 360 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 SNX25Q9H3E2 840 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 MMRN2Q9H8L6 949 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 SAMSN1Q9NSI8 373 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ZDHHC7Q9NXF8 308 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 DDX43Q9NXZ2 648 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CDH9Q9ULB4 789 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 FAM50BQ9Y247 325 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 COL4A4P53420 1690 aaPredicted RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 BRWD1Q9NSI6 2320 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 WDR27A2RRH5 827 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 BECN2A8MW95 431 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 KCNJ18B7U540 433 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 ADAM12O43184 909 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 ZMYND10O75800 440 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 GLP2RO95838 553 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 POU2F2P09086 479 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 HNRNPA1P09651 372 aaKnown RBP eCLIP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 EPCAMP16422 314 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 CDK11BP21127 795 aaKnown RBP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 TBXAS1P24557 533 aaPredicted RBP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 TUFMP49411 452 aaKnown RBP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 YWHAEP62258 255 aaKnown RBP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 TPM4P67936 248 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 NOP14P78316 857 aaKnown RBP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 KCNJ12Q14500 433 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 LEXMQ3ZCV2 418 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 LIN9Q5TKA1 542 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 CDKAL1Q5VV42 579 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 CES5AQ6NT32 575 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 FAM171BQ6P995 826 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 GBP6Q6ZN66 633 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 EP400NLQ6ZTU2 488 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 TCEAL8Q8IYN2 117 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 OR6B3Q8NGW1 331 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 SPPL2BQ8TCT7 592 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 KBTBD7Q8WVZ9 684 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 SEMA4DQ92854 862 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 JAKMIP2Q96AA8 810 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 FUBP3Q96I24 572 aaKnown RBP eCLIP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 TNIP3Q96KP6 325 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 RTP3Q9BQQ7 232 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 BCO2Q9BYV7 579 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 NIF3L1Q9GZT8 377 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 ADAM7Q9H2U9 754 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 NDST4Q9H3R1 872 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 SFXN1Q9H9B4 322 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 FANCLQ9NW38 375 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 CLEC1BQ9P126 229 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 THEGQ9P2T0 379 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 CD207Q9UJ71 328 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 FBXW11Q9UKB1 542 aa7.23□□□□□ -1.25
UBBP1-201ENST00000392399 BARX2Q9UMQ3 279 aaPredicted RBP7.23□□□□□ -1.25
UBBP1-201ENST00000392399 UNC80Q8N2C7 3258 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CCDC195A0A1B0GUA6 201 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 A8MXQ7 604 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 LINC01565O15544 149 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 XYLBO75191 536 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CLSTN1O94985 981 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 C8AP07357 584 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 WEE2P0C1S8 567 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ZNF18P17022 549 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 KCNA5P22460 613 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 MTHFRP42898 656 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ASPAP45381 313 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 CDH8P55286 799 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ARPP19P56211 112 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 MRPS5P82675 430 aaKnown RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 GCNT1Q02742 428 aa7.22□□□□□ -1.25
UBBP1-201ENST00000392399 DLX2Q07687 328 aaPredicted RBP7.22□□□□□ -1.25
UBBP1-201ENST00000392399 ADCY1Q08828 1119 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms