RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 SCN10AQ9Y5Y9 1956 aa21.12■□□□□ 0.97
CSNK1D-203ENST00000392334 PODXLO00592 558 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 TSPAN1O60635 241 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 CAND2O75155 1236 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 MTA2O94776 668 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 CCDC91Q7Z6B0 441 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 BRSK2Q8IWQ3 736 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 TMEM130Q8N3G9 435 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 KREMEN1Q96MU8 473 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 MTG1Q9BT17 334 aaPredicted RBP21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 TRIM31Q9BZY9 425 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 LRRC4CQ9HCJ2 640 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 KLC4Q9NSK0 619 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 GRHL1Q9NZI5 618 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 FRMPD3Q5JV73 1810 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 SMIM35A0A1B0GVV1 85 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 PMM2O15305 246 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 VNN1O95497 513 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 HSPA1AP0DMV8 641 aaKnown RBP21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 HSPA1BP0DMV9 641 aaKnown RBP21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 CXCL8P10145 99 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 PIK3CAP42336 1068 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 MMP13P45452 471 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 NBPF20Q3BBV1 942 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 ZACNQ401N2 412 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 FAM47CQ5HY64 1035 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 DENND2CQ68D51 928 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 C15orf39Q6ZRI6 1047 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 PALB2Q86YC2 1186 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 IFNLR1Q8IU57 520 aaPredicted RBP21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 CHMP6Q96FZ7 201 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 CGRRF1Q99675 332 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.11■□□□□ 0.972e-11■■■■■ 38.1
CSNK1D-203ENST00000392334 KDM4CQ9H3R0 1056 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 SLC40A1Q9NP59 571 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 ACP6Q9NPH0 428 aa21.11■□□□□ 0.97
CSNK1D-203ENST00000392334 HLA-DRAP01903 254 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 FAM187BQ17R55 369 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 ZNF410Q86VK4 478 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 HELQQ8TDG4 1101 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 DHX38Q92620 1227 aaKnown RBP21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 RUNDC3BQ96NL0 473 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 NT5C1BQ96P26 610 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 ZSWIM1Q9BR11 485 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 MTMR12Q9C0I1 747 aa21.1■□□□□ 0.97
CSNK1D-203ENST00000392334 KPNA6O60684 536 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 ZNF211Q13398 564 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CYP1B1Q16678 543 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 RNF180Q86T96 592 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 TMEM40Q8WWA1 233 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 RNF25Q96BH1 459 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CCDC114Q96M63 670 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 PCDHA3Q9Y5H8 950 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CHUKO15111 745 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CST3P01034 146 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 SHBGP04278 402 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 STAG3L1P0CL83 205 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CST5P28325 142 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 GSCP56915 257 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 GPC5P78333 572 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 TFAMQ00059 246 aaKnown RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CPLX4Q7Z7G2 160 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 PRELID2Q8N945 189 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 ZNF317Q96PQ6 595 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 NCAPGQ9BPX3 1015 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 GCOM2Q9BZD3 368 aaPredicted RBP21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 CCDC134Q9H6E4 229 aa21.09■□□□□ 0.97
CSNK1D-203ENST00000392334 DNM1LO00429 736 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 RTN2O75298 545 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 AGTP01019 485 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 PEX5P50542 639 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 PLTPP55058 493 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 ADCY2Q08462 1091 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 C6orf118Q5T5N4 469 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 CATSPER4Q7RTX7 472 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 FBXO25Q8TCJ0 367 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 CCT6BQ92526 530 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 WNT8AQ9H1J5 351 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 SEPT11Q9NVA2 429 aaKnown RBP21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 CTTNBP2NLQ9P2B4 639 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 MTRF1LQ9UGC7 380 aaKnown RBP21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 SNX24Q9Y343 169 aa21.08■□□□□ 0.97
CSNK1D-203ENST00000392334 FTLP02792 175 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 ACLYP53396 1101 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 TNFAIP8L3Q5GJ75 292 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 PCSK9Q8NBP7 692 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 SLC20A1Q8WUM9 679 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 ATXN2LQ8WWM7 1075 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 DEFB118Q96PH6 123 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 RPF1Q9H9Y2 349 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 CALCAP01258 141 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 GZMAP12544 262 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 HOXA11P31270 313 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 MFAP3P55082 362 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 WDR44Q5JSH3 913 aa21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 GDF6Q6KF10 455 aaPredicted RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 ADAT2Q7Z6V5 191 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 CTU1Q7Z7A3 348 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-203ENST00000392334 CD101Q93033 1021 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms