RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 NIPA2Q8N8Q9 360 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 OR2W6PQ8NHA6 318 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 HEMGNQ9BXL5 484 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 FAM49AQ9H0Q0 323 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-203ENST00000391944 FLRT1Q9NZU1 646 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 CYTH4Q9UIA0 394 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 SMIM35A0A1B0GVV1 85 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 MBLAC1A4D2B0 266 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-203ENST00000391944 HMGB1P1B2RPK0 211 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-203ENST00000391944 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
ERCC2-203ENST00000391944 SNX1Q13596 522 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 EMC10Q5UCC4 262 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 SH2D3CQ8N5H7 860 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 ATG4AQ8WYN0 398 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 ART4Q93070 314 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 PLEKHA5Q9HAU0 1116 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 MTRF1LQ9UGC7 380 aaKnown RBP20.21■□□□□ 0.83
ERCC2-203ENST00000391944 HMGXB4Q9UGU5 601 aa20.21■□□□□ 0.83
ERCC2-203ENST00000391944 F8VP50 259 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 RPS6KA5O75582 802 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 MYZAPP0CAP1 466 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 CETN2P41208 172 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 SKOR1P84550 965 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 TMEM62Q0P6H9 643 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 CCNG2Q16589 344 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 OLFML2BQ68BL8 750 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 GRK7Q8WTQ7 553 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 KIF12Q96FN5 646 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 R3HDM2Q9Y2K5 976 aaKnown RBP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 SIGLEC16A6NMB1 481 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 ECM2O94769 699 aaPredicted RBP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 NPTXRO95502 500 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 KRT17Q04695 432 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 INCA1Q0VD86 236 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 NFX1Q12986 1120 aaKnown RBP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 ORC1Q13415 861 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 PCBP1Q15365 356 aaKnown RBP eCLIP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 SLC27A1Q6PCB7 646 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 LEKR1Q6ZMV7 388 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 RUFY4Q6ZNE9 571 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 TLK2Q86UE8 772 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 TTC39CQ8N584 583 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 ATL2Q8NHH9 583 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 RBM41Q96IZ5 413 aaKnown RBP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 PKNOX2Q96KN3 472 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 CDHR5Q9HBB8 845 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 BARX2Q9UMQ3 279 aaPredicted RBP20.2■□□□□ 0.82
ERCC2-203ENST00000391944 GINS2Q9Y248 185 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 DERAQ9Y315 318 aa20.2■□□□□ 0.82
ERCC2-203ENST00000391944 VDRP11473 427 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 TCF4P15884 667 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 GJC1P36383 396 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 PMS2P54278 862 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 GSCP56915 257 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 CNGA2Q16280 664 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 ATP13A4Q4VNC1 1196 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 CATSPER4Q7RTX7 472 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 ANKS1BQ7Z6G8 1248 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 USP6NLQ92738 828 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 RNF25Q96BH1 459 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 PABPC3Q9H361 631 aaKnown RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 WHRNQ9P202 907 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 WDR35Q9P2L0 1181 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 TRIP11Q15643 1979 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 MANSC4A6NHS7 340 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 CYP2C9P11712 490 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 KRT3P12035 628 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 RFC1P35251 1148 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 EIF3BP55884 814 aaKnown RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 TAF1CQ15572 869 aaPredicted RBP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 RASAL3Q86YV0 1011 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 CPXM1Q96SM3 734 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 EPB41L4BQ9H329 900 aa20.19■□□□□ 0.82
ERCC2-203ENST00000391944 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.19■□□□□ 0.82
ERCC2-203ENST00000391944 MICAL2O94851 1124 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 GAS8O95995 478 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 HMGCRP04035 888 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 ZNF157P51786 506 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-203ENST00000391944 PSMC1P62191 440 aaKnown RBP20.18■□□□□ 0.82
ERCC2-203ENST00000391944 ADAM17P78536 824 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 PTK6Q13882 451 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 MFSD10Q14728 455 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 SLITRK1Q96PX8 696 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 CAPS2Q9BXY5 557 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 SNTG2Q9NY99 539 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 TJP2Q9UDY2 1190 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 KIAA1257Q9ULG3 409 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 A6NNZ2 444 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 DARSP14868 501 aaKnown RBP20.18■□□□□ 0.82
ERCC2-203ENST00000391944 COPS2P61201 443 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 CALCOCO2Q13137 446 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 ZNF268Q14587 947 aaPredicted RBP20.18■□□□□ 0.82
ERCC2-203ENST00000391944 ZSCAN26Q16670 478 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 TUBB8Q3ZCM7 444 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 NOTUMQ6P988 496 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 KDM7AQ6ZMT4 941 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 FNIP1Q8TF40 1166 aa20.18■□□□□ 0.82
ERCC2-203ENST00000391944 HEXIM2Q96MH2 286 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms