RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 FAM193AP78312 1265 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 DPTQ07507 201 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 TUBB3Q13509 450 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 SF3B3Q15393 1217 aaKnown RBP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 KIAA0753Q2KHM9 967 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 LONRF3Q496Y0 759 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 RNF220Q5VTB9 566 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 LMBRD2Q68DH5 695 aaPredicted RBP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 SWSAP1Q6NVH7 229 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 DARS2Q6PI48 645 aaKnown RBP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 APOA5Q6Q788 366 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 LAYNQ6UX15 382 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 Q6ZPA2 131 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 CHST15Q7LFX5 561 aaPredicted RBP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 TMPRSS9Q7Z410 1059 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 DGKHQ86XP1 1220 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 FAM9AQ8IZU1 332 aaPredicted RBP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 LNX2Q8N448 690 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 SLC44A3Q8N4M1 653 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 B3GALNT2Q8NCR0 500 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 OR6B3Q8NGW1 331 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 IL31RAQ8NI17 732 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 FBXO41Q8TF61 875 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 LRTOMTQ8WZ04 291 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 LINC00476Q8WZB0 136 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 SLC46A1Q96NT5 459 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 MOGAT1Q96PD6 335 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 SORCS2Q96PQ0 1159 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 HEPHQ9BQS7 1158 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 AIFM2Q9BRQ8 373 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 TRIM54Q9BYV2 358 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 C22orf23Q9BZE7 217 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 TTYH3Q9C0H2 523 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 SMOC2Q9H3U7 446 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 KCTD5Q9NXV2 234 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 TMX2Q9Y320 296 aa3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU6-550P-201ENST00000391057 MYO1CO00159 1063 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 GOLIM4O00461 696 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 FRS3O43559 492 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 PEX1O43933 1283 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 HRGP04196 525 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 ATXN1LP0C7T5 689 aaKnown RBP3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SRGNP10124 158 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 BRAFP15056 766 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 PPP3CBP16298 524 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 KRT4P19013 534 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 EN2P19622 333 aaPredicted RBP3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 GATA3P23771 443 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 CD6P30203 668 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SATB1Q01826 763 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 MPP3Q13368 585 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SLC44A4Q53GD3 710 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 Q6ZNX1 250 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 TTC17Q96AE7 1141 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 TIFAQ96CG3 184 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SUCLG2Q96I99 432 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 OSBPL9Q96SU4 736 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SPATA5L1Q9BVQ7 753 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 MRIQ9BWK5 157 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 LRRC27Q9C0I9 530 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SYBUQ9NX95 663 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 XPR1Q9UBH6 696 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 TPCN1Q9ULQ1 816 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 PAXBP1Q9Y5B6 917 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 SPATA31A3Q5VYP0 1347 aa3.83□□□□□ -1.8
RNU6-550P-201ENST00000391057 COL4A3Q01955 1670 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 MAST3O60307 1309 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 WDR33Q9C0J8 1336 aaKnown RBP3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 A0A087X1B8 175 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 MYO1FO00160 1098 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 BTN3A1O00481 513 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 KIF3BO15066 747 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 TBX3O15119 743 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 TBC1D4O60343 1298 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 RHOBTB3O94955 611 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 ESRRBO95718 433 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 GCP02774 474 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 RHCEP18577 417 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 PEX2P28328 305 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 VIPR2P41587 438 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 SLC11A2P49281 568 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 TOB1P50616 345 aaPredicted RBP3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 ARFIP2P53365 341 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 SEC24CP53992 1094 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 UCP3P55916 312 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 LOXL3P58215 753 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 RHDQ02161 417 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 SLC13A2Q13183 592 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 RAB32Q13637 225 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 BOP1Q14137 746 aaKnown RBP3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 GALEQ14376 348 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 IQCB1Q15051 598 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 POLD3Q15054 466 aaPredicted RBP3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 RBM20Q5T481 1227 aaKnown RBP3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 VWA1Q6PCB0 445 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 TMEM108Q6UXF1 575 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 TOR1AIP2Q8NFQ8 470 aa3.82□□□□□ -1.8
RNU6-550P-201ENST00000391057 SLC30A5Q8TAD4 765 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms