RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 AFAP1L2Q8N4X5 818 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 PSD4Q8NDX1 1056 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 KLHDC4Q8TBB5 520 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 C5orf34Q96MH7 638 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 OSBPL9Q96SU4 736 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 SMOQ99835 787 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 TMEM79Q9BSE2 394 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 PACSIN1Q9BY11 444 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 LIMCH1Q9UPQ0 1083 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 AFG3L2Q9Y4W6 797 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 IPPQ9Y573 584 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 KAT6AQ92794 2004 aa2.17□□□□□ -2.06
RNU6-1228P-201ENST00000391014 CYP2D7A0A087X1C5 515 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 F2RL2O00254 374 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 HTRA2O43464 458 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 BRINP1O60477 761 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 VPS4BO75351 444 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 NDUFB7P17568 137 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 MMP13P45452 471 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 PSMC1P62191 440 aaKnown RBP2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 SNAPC2Q13487 334 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 PLAC9Q5JTB6 97 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 PXDC1Q5TGL8 231 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 MAVSQ7Z434 540 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 NPM2Q86SE8 214 aaKnown RBP2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 KRT73Q86Y46 540 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 NRACQ8N912 160 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 C8orf58Q8NAV2 365 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 FANCBQ8NB91 859 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 UBXN4Q92575 508 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 TBC1D5Q92609 795 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 KAT5Q92993 513 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 CLPTM1LQ96KA5 538 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 DRC1Q96MC2 740 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 VRK1Q99986 396 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 FAM126AQ9BYI3 521 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 EBF3Q9H4W6 596 aa2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 TUBA8Q9NY65 449 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1228P-201ENST00000391014 NT5C1B-RDH14C9J2C7 533 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ENPP3O14638 875 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 NDUFS2O75306 463 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 BCAR3O75815 825 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 KIF20AO95235 890 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 C5AR1P21730 350 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CYP2C18P33260 490 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PHKA1P46020 1223 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 EEFSECP57772 596 aaKnown RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 HABP2Q14520 560 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 TRIP6Q15654 476 aaKnown RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CCDC93Q567U6 631 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 AARS2Q5JTZ9 985 aaKnown RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PCID2Q5JVF3 399 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ANKRD16Q6P6B7 361 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 NAPRTQ6XQN6 538 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 MEPCEQ7L2J0 689 aaKnown RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 SLC29A4Q7RTT9 530 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CNGA4Q8IV77 575 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PNLDC1Q8NA58 520 aaKnown RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 JADE3Q92613 823 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 FAM136AQ96C01 138 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PUS7Q96PZ0 661 aaKnown RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 TINAGL1Q9GZM7 467 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CAAP1Q9H8G2 361 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 DUSP22Q9NRW4 184 aa2.15□□□□□ -2.07
RNU6-1228P-201ENST00000391014 FNDC1Q4ZHG4 1894 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 IGKV2D-30A0A075B6S6 120 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CCDC154A6NI56 674 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 TRIM75PA6NK02 468 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ZNF785A8K8V0 405 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 E5RJQ4 531 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PRR23D1E9PI22 279 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 GPR39O43194 453 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 SGTAO43765 313 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PCDHGA12O60330 932 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ANXA1P04083 346 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 GJB1P08034 283 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 IL6RP08887 468 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PRR23D2P0DMB1 279 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ENGP17813 658 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 MALP21145 153 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CD6P30203 668 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ALDH9A1P49189 494 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CLCN2P51788 898 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 HOXA4Q00056 320 aaPredicted RBP2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 DSC2Q02487 901 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 FAPQ12884 760 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 RAB39AQ14964 217 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 TWIST1Q15672 202 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 INAVAQ3KP66 663 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 KHDC1Q4VXA5 237 aaKnown RBP2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 MIDNQ504T8 468 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 TREML2Q5T2D2 321 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 DLK2Q6UY11 383 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 ZNF804AQ7Z570 1209 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 DTX2Q86UW9 622 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 PDSS2Q86YH6 399 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 NANOGP1Q8N7R0 232 aa2.14□□□□□ -2.07
RNU6-1228P-201ENST00000391014 CYP2W1Q8TAV3 490 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms