RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.37□□□□□ -1.71
TRAV40-201ENST00000390467 LMBRD1Q9NUN5 540 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 SERGEFQ9UGK8 458 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 ZDHHC8Q9ULC8 765 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 SPEF1Q9Y4P9 236 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 AOX1Q06278 1338 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 DNAJC9-AS1A6NH13 148 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 TRIAP1O43715 76 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 ARIH2O95376 493 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 EBLN1P0CF75 366 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 JUPP14923 745 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 ITGALP20701 1170 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 CD6P30203 668 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 GCLCP48506 637 aaPredicted RBP4.36□□□□□ -1.71
TRAV40-201ENST00000390467 ZNF134P52741 427 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 EXOSC10Q01780 885 aaKnown RBP4.36□□□□□ -1.71
TRAV40-201ENST00000390467 EIF2B5Q13144 721 aaKnown RBP4.36□□□□□ -1.71
TRAV40-201ENST00000390467 THEMIS2Q5TEJ8 643 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 USP37Q86T82 979 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 FAM46DQ8NEK8 389 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 KLHDC4Q8TBB5 520 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 CHMP4CQ96CF2 233 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 HSPBAP1Q96EW2 488 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 HAPLN3Q96S86 360 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 HESX1Q9UBX0 185 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 WNT6Q9Y6F9 365 aa4.36□□□□□ -1.71
TRAV40-201ENST00000390467 GCOM1H8Y6P7 765 aaPredicted RBP4.35□□□□□ -1.71
TRAV40-201ENST00000390467 DCLK1O15075 740 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 DNAJB5O75953 348 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 TTLL1O95922 423 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 PIM1P11309 404 aaPredicted RBP4.35□□□□□ -1.71
TRAV40-201ENST00000390467 CDK4P11802 303 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 ZFXP17010 805 aaPredicted RBP4.35□□□□□ -1.71
TRAV40-201ENST00000390467 ABCG1P45844 678 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 NKX6-1P78426 367 aaPredicted RBP4.35□□□□□ -1.71
TRAV40-201ENST00000390467 SP2Q02086 613 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 TFF2Q03403 129 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 SRSF4Q08170 494 aaKnown RBP4.35□□□□□ -1.71
TRAV40-201ENST00000390467 PLS1Q14651 629 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 TBCCQ15814 346 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 PGS1Q32NB8 556 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 FCRLBQ6BAA4 426 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 MAVSQ7Z434 540 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 ZBTB46Q86UZ6 589 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 GLCCI1Q86VQ1 547 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 HASPINQ8TF76 798 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 ANKS1AQ92625 1134 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 FAM136AQ96C01 138 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 SLC46A1Q96NT5 459 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 ALG8Q9BVK2 526 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 EHD3Q9NZN3 535 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 RAD54BQ9Y620 910 aa4.35□□□□□ -1.71
TRAV40-201ENST00000390467 PPM1DO15297 605 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 SOAT2O75908 522 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 GNAI2P04899 355 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 HDCP19113 662 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 CCT8P50990 548 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 CLCN2P51788 898 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 NEK2P51955 445 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 SOX10P56693 466 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 PTPROQ16827 1216 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 FAM160B1Q5W0V3 765 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 PAPD7Q5XG87 772 aaKnown RBP4.34□□□□□ -1.71
TRAV40-201ENST00000390467 TMEM108Q6UXF1 575 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 PCSK9Q8NBP7 692 aaKnown RBP4.34□□□□□ -1.71
TRAV40-201ENST00000390467 PLBD2Q8NHP8 589 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 MVB12AQ96EY5 273 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 SLC35A4Q96G79 324 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 TTYH3Q9C0H2 523 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 SIK2Q9H0K1 926 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 KMT5AQ9NQR1 393 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 PNPOQ9NVS9 261 aa4.34□□□□□ -1.71
TRAV40-201ENST00000390467 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRAV40-201ENST00000390467 UNC5CO95185 931 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 ERBB2P04626 1255 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 ALDH2P05091 517 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 HNRNPCP07910 306 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRAV40-201ENST00000390467 LIPAP38571 399 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 KRTAP10-11P60412 298 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
TRAV40-201ENST00000390467 FAM153CQ494X1 144 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 EMC10Q5UCC4 262 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF782Q6ZMW2 699 aaPredicted RBP4.33□□□□□ -1.72
TRAV40-201ENST00000390467 PTF1AQ7RTS3 328 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.33□□□□□ -1.72
TRAV40-201ENST00000390467 HOOK2Q96ED9 719 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 FAM167AQ96KS9 214 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 SLC12A5Q9H2X9 1139 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 TCF7L1Q9HCS4 588 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 SERTAD4Q9NUC0 356 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 RNF7Q9UBF6 113 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 PADI4Q9UM07 663 aa4.33□□□□□ -1.72
TRAV40-201ENST00000390467 LINC01548A6NM66 108 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 H0YIZ8 118 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 H3BUI4 141 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 ZNF213O14771 459 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 PRKCGP05129 697 aa4.32□□□□□ -1.72
TRAV40-201ENST00000390467 NHLRC4P0CG21 123 aaPredicted RBP4.32□□□□□ -1.72
TRAV40-201ENST00000390467 PF4V1P10720 104 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms