RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 CLUL1Q15846 466 aa18.67■□□□□ 0.58
SQSTM1-202ENST00000389805 MTDHQ86UE4 582 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-202ENST00000389805 DDX1Q92499 740 aaKnown RBP18.67■□□□□ 0.58
SQSTM1-202ENST00000389805 INPP5DQ92835 1189 aa18.67■□□□□ 0.58
SQSTM1-202ENST00000389805 FBXL18Q96ME1 805 aa18.67■□□□□ 0.58
SQSTM1-202ENST00000389805 UBN1Q9NPG3 1134 aa18.67■□□□□ 0.58
SQSTM1-202ENST00000389805 WDR91A4D1P6 747 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 POC1B-GALNT4F8VUJ3 575 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 GZMAP12544 262 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 VHLP40337 213 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 SNRPFP62306 86 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 WASHC2DQ5SRD0 308 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 DAB2IPQ5VWQ8 1189 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 C11orf63Q6NUN7 778 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 IRGCQ6NXR0 463 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 TRPM4Q8TD43 1214 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 NPHS2Q9NP85 383 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 STOML1Q9UBI4 398 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 ZFP69BQ9UJL9 534 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 ANAPC5Q9UJX4 755 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 CAPN9O14815 690 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 ZCCHC18P0CG32 403 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 RPS12P25398 132 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 MARK3P27448 753 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 HADHBP55084 474 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 CDR2Q01850 454 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 MOGSQ13724 837 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 SEZ6Q53EL9 994 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 DCAF15Q66K64 600 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 ABHD15Q6UXT9 468 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 ARHGAP22Q7Z5H3 698 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 GPD1LQ8N335 351 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 SAMD3Q8N6K7 520 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 STARD13Q9Y3M8 1113 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 COL11A1P12107 1806 aaPredicted RBP18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 PMM2O15305 246 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 CDH16O75309 829 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 DGAT1O75907 488 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 KPNB1Q14974 876 aaKnown RBP18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 ZBTB41Q5SVQ8 909 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 RHBDF2Q6PJF5 856 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 SLC16A10Q8TF71 515 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 SENP7Q9BQF6 1050 aa18.66■□□□□ 0.58
SQSTM1-202ENST00000389805 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.66■□□□□ 0.581e-6■■□□□ 13.2
SQSTM1-202ENST00000389805 ZNF541Q9H0D2 1346 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 ABLIM1O14639 778 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 NLRP11P59045 1033 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 OVGP1Q12889 678 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 CYP1B1Q16678 543 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 C4orf50Q6ZRC1 276 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 ANKRD35Q8N283 1001 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 ZFAND2BQ8WV99 257 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 SNF8Q96H20 258 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 HAPLN2Q9GZV7 340 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 PTPRJQ12913 1337 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 DCTN3O75935 186 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 ASMTLO95671 621 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 CCDC125Q86Z20 511 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 CD101Q93033 1021 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 TEX13BQ9BXU2 312 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 UBE2OQ9C0C9 1292 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 OCEL1Q9H607 264 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 WHRNQ9P202 907 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 ZNF112Q9UJU3 913 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 ADAMTS5Q9UNA0 930 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 LRCH1Q9Y2L9 728 aa18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.65■□□□□ 0.58
SQSTM1-202ENST00000389805 CFHP08603 1231 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 TNNI1P19237 187 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 RASSF2P50749 326 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 ACSBG2Q5FVE4 666 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 TMC2Q8TDI7 906 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 CADM1Q9BY67 442 aaKnown RBP18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 SIGLEC16A6NMB1 481 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 MAFGO15525 162 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 GGPS1O95749 300 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 CYP1A2P05177 515 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 SKIP12755 728 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 PTPN4P29074 926 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 RPA3P35244 121 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 LIG4P49917 911 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 BRDTQ58F21 947 aaPredicted RBP18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 CATSPERGQ6ZRH7 1159 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 NLRP9Q7RTR0 991 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 RDM1Q8NG50 284 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 C10orf82Q8WW14 230 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 ITFG2Q969R8 447 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 VTI1AQ96AJ9 217 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 HERPUD2Q9BSE4 406 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 HEMGNQ9BXL5 484 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 WNT8AQ9H1J5 351 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 ACAD9Q9H845 621 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 GINM1Q9NU53 330 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 ARHGAP28Q9P2N2 729 aa18.64■□□□□ 0.57
SQSTM1-202ENST00000389805 CFAP69A5D8W1 941 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 FGFR1P11362 822 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 ATF2P15336 505 aa18.63■□□□□ 0.57
SQSTM1-202ENST00000389805 KRT15P19012 456 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms