RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 TUFMP49411 452 aaKnown RBP10.48□□□□□ -0.73
IFT88-203ENST00000389373 GUCY2FP51841 1108 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 DMP1Q13316 513 aaPredicted RBP10.48□□□□□ -0.73
IFT88-203ENST00000389373 MYBPC2Q14324 1141 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 SLC39A12Q504Y0 691 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 C2orf27AQ580R0 203 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 TXNDC8Q6A555 127 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 TAS1R3Q7RTX0 852 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 PROSER1Q86XN7 944 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 TMEFF1Q8IYR6 380 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 HDDC3Q8N4P3 179 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 CPA6Q8N4T0 437 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 CCDC33Q8N5R6 958 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 HNRNPLLQ8WVV9 542 aaKnown RBP10.48□□□□□ -0.73
IFT88-203ENST00000389373 RLN3Q8WXF3 142 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 WASF1Q92558 559 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 TNFRSF25Q93038 417 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 TMEM134Q9H6X4 195 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 IL21Q9HBE4 155 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 TDP1Q9NUW8 608 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 MAGED2Q9UNF1 606 aaPredicted RBP10.48□□□□□ -0.73
IFT88-203ENST00000389373 GPSM3Q9Y4H4 160 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 EML5Q05BV3 1969 aa10.48□□□□□ -0.73
IFT88-203ENST00000389373 SFI1A8K8P3 1242 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 SLC16A4O15374 487 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 CFIP05156 583 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 CXCL8P10145 99 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 ATF6P18850 670 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 FAM193AP78312 1265 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 SCAPQ12770 1279 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 STRN3Q13033 797 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 PDGFRLQ15198 375 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 ECM1Q16610 540 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 LPCAT2Q7L5N7 544 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 STKLD1Q8NE28 680 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 RIN3Q8TB24 985 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 EZH1Q92800 747 aaPredicted RBP10.47□□□□□ -0.73
IFT88-203ENST00000389373 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 ECT2Q9H8V3 914 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 DUS2Q9NX74 493 aaKnown RBP10.47□□□□□ -0.73
IFT88-203ENST00000389373 EVLQ9UI08 416 aaPredicted RBP10.47□□□□□ -0.73
IFT88-203ENST00000389373 MBD1Q9UIS9 605 aaPredicted RBP10.47□□□□□ -0.73
IFT88-203ENST00000389373 ATXN2Q99700 1313 aaKnown RBP10.47□□□□□ -0.73
IFT88-203ENST00000389373 STK36Q9NRP7 1315 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 SPEGQ15772 3267 aa10.47□□□□□ -0.73
IFT88-203ENST00000389373 ANTXRLA6NF34 631 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 H0Y626 953 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 ABLIM1O14639 778 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 PPEF2O14830 753 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 HIP1RO75146 1068 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 TRIM16O95361 564 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 ODC1P11926 461 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 PROZP22891 400 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 LRPAP1P30533 357 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 IFNAR2P48551 515 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 NR1H3Q13133 447 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 NOLC1Q14978 699 aaKnown RBP eCLIP10.46□□□□□ -0.73
IFT88-203ENST00000389373 ZNF174Q15697 407 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 DIS3L2Q8IYB7 885 aaKnown RBP10.46□□□□□ -0.73
IFT88-203ENST00000389373 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 FRMD1Q8N878 549 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 MRPS31Q92665 395 aaKnown RBP10.46□□□□□ -0.73
IFT88-203ENST00000389373 LRIG1Q96JA1 1093 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 SENP8Q96LD8 212 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 KIF9Q9HAQ2 790 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 TRPC7Q9HCX4 862 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 TMEM74BQ9NUR3 256 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 DDX19AQ9NUU7 478 aaKnown RBP10.46□□□□□ -0.73
IFT88-203ENST00000389373 ABI2Q9NYB9 513 aaPredicted RBP10.46□□□□□ -0.73
IFT88-203ENST00000389373 BCCIPQ9P287 314 aaKnown RBP eCLIP10.46□□□□□ -0.73
IFT88-203ENST00000389373 TBX20Q9UMR3 447 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 UBQLN1Q9UMX0 589 aaKnown RBP10.46□□□□□ -0.73
IFT88-203ENST00000389373 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
IFT88-203ENST00000389373 LACTBL1A8MY62 500 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 CLDN3O15551 220 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 XPOTO43592 962 aaKnown RBP10.45□□□□□ -0.74
IFT88-203ENST00000389373 TOM1L1O75674 476 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 ALDH1A2O94788 518 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 REC8O95072 547 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 CTDNEP1O95476 244 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 F11P03951 625 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 TYMPP19971 482 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 DDX6P26196 483 aaKnown RBP eCLIP10.45□□□□□ -0.74
IFT88-203ENST00000389373 PTGER3P43115 390 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 AARSP49588 968 aaKnown RBP eCLIP10.45□□□□□ -0.74
IFT88-203ENST00000389373 NLRP12P59046 1061 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 SEMA3BQ13214 749 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 TRIM29Q14134 588 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 MTF1Q14872 753 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 SDHAF4Q5VUM1 108 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 PIP4P1Q86T03 277 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 METTL23Q86XA0 190 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 SYT12Q8IV01 421 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 DEFB119Q8N690 84 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 SPRYD3Q8NCJ5 442 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 MDGA1Q8NFP4 955 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 OR10T2Q8NGX3 314 aa10.45□□□□□ -0.74
IFT88-203ENST00000389373 USP33Q8TEY7 942 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms