RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 AOPEPQ8N6M6 819 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 RBMXL3Q8N7X1 1067 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 DCBLD1Q8N8Z6 715 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 C8orf58Q8NAV2 365 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TMIEQ8NEW7 156 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 C16orf52Q8NHV5 167 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 KLHDC4Q8TBB5 520 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 LMBR1Q8WVP7 490 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ATRIPQ8WXE1 791 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TBC1D5Q92609 795 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 NINJ1Q92982 152 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 FAM136AQ96C01 138 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 THOC3Q96J01 351 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TMX3Q96JJ7 454 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 LYZL4Q96KX0 146 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PPP1R10Q96QC0 940 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 MMS19Q96T76 1030 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 MACROD1Q9BQ69 325 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TRMOQ9BU70 441 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PACSIN1Q9BY11 444 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ZSWIM4Q9H7M6 989 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TXLNGQ9NUQ3 528 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 POT1Q9NUX5 634 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 DNAJC28Q9NX36 388 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TMEM260Q9NX78 707 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 JKAMPQ9P055 326 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 CCNL1Q9UK58 526 aaPredicted RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PCDHA13Q9Y5I0 950 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 SQORQ9Y6N5 450 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TTC3P53804 2025 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 SPATA31A3Q5VYP0 1347 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TCF20Q9UGU0 1960 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 E5RJQ4 531 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 E9PLN8 166 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 E9PSI1 815 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 MYO1FO00160 1098 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 GTPBP1O00178 669 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DSCR3O14972 297 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ADAMTS3O15072 1205 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SLC43A1O75387 559 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 BCAR3O75815 825 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 NXPH3O95157 252 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 OAZ2O95190 189 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 PDE8BO95263 885 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 FESP07332 822 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 T-ENOLP0DO92 83 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CYP2A6P11509 494 aaPredicted RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CYP19A1P11511 503 aaPredicted RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CHRM3P20309 590 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ITGALP20701 1170 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 LPOP22079 712 aaPredicted RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 HOXD9P28356 352 aaPredicted RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CD6P30203 668 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 LIPAP38571 399 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CDKN2AP42771 156 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 PHKA1P46020 1223 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CLCN2P51788 898 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SLC5A3P53794 718 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 PSMC1P62191 440 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CYP4F2P78329 520 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SP2Q02086 613 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 RHDQ02161 417 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 GHRHRQ02643 423 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF91Q05481 1191 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 STRN3Q13033 797 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ERV3-1Q14264 604 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF585BQ52M93 769 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DALRD3Q5D0E6 543 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 TREML2Q5T2D2 321 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 UBAP2Q5T6F2 1119 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF618Q5T7W0 954 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 VPS53Q5VIR6 699 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ATG9BQ674R7 924 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 FCRL6Q6DN72 434 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 TAF2Q6P1X5 1199 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF549Q6P9A3 640 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 SERPINA13PQ6UXR4 307 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 TRIM72Q6ZMU5 477 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 GADL1Q6ZQY3 521 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF365Q70YC5 407 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DDX46Q7L014 1031 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 PARS2Q7L3T8 475 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 MAVSQ7Z434 540 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF804AQ7Z570 1209 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 WDR53Q7Z5U6 358 aaPredicted RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 RNF180Q86T96 592 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 PIM3Q86V86 326 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DCP1BQ8IZD4 617 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 KRT78Q8N1N4 520 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 LRRC71Q8N4P6 559 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.79□□□□□ -2.281e-33■■■■■ 155.4
SNORD28-201ENST00000384706 IL17RDQ8NFM7 739 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CYP2W1Q8TAV3 490 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 POC1BQ8TC44 478 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 NRG4Q8WWG1 115 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 XAGE5Q8WWM1 108 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 APPBP2Q92624 585 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 CUL5Q93034 780 aa0.79□□□□□ -2.28
SNORD28-201ENST00000384706 DAZAP1Q96EP5 407 aaKnown RBP0.79□□□□□ -2.28
SNORD28-201ENST00000384706 VCPIP1Q96JH7 1222 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms