RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 COL5A2P05997 1499 aaPredicted RBP0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 H7C1Q1 480 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 ZBTB11O95625 1053 aaPredicted RBP0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 LY86O95711 162 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 HOXC6P09630 235 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 PYGMP11217 842 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 TBXAS1P24557 533 aaPredicted RBP0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 PDLIM4P50479 330 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 PEX6Q13608 980 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 MFSD14BQ5SR56 506 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 MAVSQ7Z434 540 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 CLNKQ7Z7G1 428 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 DRC7Q8IY82 874 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 DLG3Q92796 817 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 FBXW5Q969U6 566 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 HIST1H2AHQ96KK5 128 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 SNX27Q96L92 541 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 HIST1H2AJQ99878 128 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 CTRCQ99895 268 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 NOL10Q9BSC4 688 aaKnown RBP0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 BARHL1Q9BZE3 327 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 DECR2Q9NUI1 292 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 HIF1ANQ9NWT6 349 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 DKK3Q9UBP4 350 aa0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 SRP68Q9UHB9 627 aaKnown RBP0.03□□□□□ -2.4
RNU6-540P-201ENST00000384622 WDR81Q562E7 1941 aa0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 CACNA1FO60840 1977 aa0.03□□□□□ -2.41
RNU6-540P-201ENST00000384622 AGRNO00468 2067 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 A0A0A6YYJ9 748 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 KRTAP16-1A8MUX0 517 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CXorf49A8MYA2 514 aaPredicted RBP0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 TMEM232C9JQI7 657 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZNF561-AS1K7EIQ3 104 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ITGA10O75578 1167 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 SNRNP70P08621 437 aaKnown RBP0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 SLC6A2P23975 617 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CYP2C18P33260 490 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 POLD2P49005 469 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ALDH9A1P49189 494 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ALDH7A1P49419 539 aaKnown RBP0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 FLT3LGP49771 235 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 HSD17B4P51659 736 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PAK1Q13153 545 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PPP2R5EQ16537 467 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PREPLQ4J6C6 727 aaPredicted RBP0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ANO7Q6IWH7 933 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 FAM166AQ6J272 317 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 SERPINA13PQ6UXR4 307 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ERMP1Q7Z2K6 904 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZNF584Q8IVC4 421 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 FKBP10Q96AY3 582 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 SCMH1Q96GD3 660 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 DUX5Q96PT3 197 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CRBNQ96SW2 442 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 CAAP1Q9H8G2 361 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 DDX43Q9NXZ2 648 aaKnown RBP0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 TFCP2L1Q9NZI6 479 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 PPT2Q9UMR5 302 aa0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 RP1L1Q8IWN7 2480 aaPredicted RBP0.02□□□□□ -2.41
RNU6-540P-201ENST00000384622 MUC2Q02817 5179 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 TMEM272A0A1B0GTI8 110 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 UBA6A0AVT1 1052 aaPredicted RBP0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 PHGR1C9JFL3 82 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 GSTA4O15217 222 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 RNF8O76064 485 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NXPH3O95157 252 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NDUFB8O95169 186 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 EPN2O95208 641 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 POMCP01189 267 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 THBS4P35443 961 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 DYRK1AQ13627 763 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 PTGR1Q14914 329 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZNF750Q32MQ0 723 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 KRTAP21-1Q3LI58 79 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 FAM47AQ5JRC9 791 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 TTC38Q5R3I4 469 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 C16orf59Q7L2K0 433 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 FBXO33Q7Z6M2 555 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 NOSTRINQ8IVI9 506 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 SLC15A3Q8IY34 581 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 C19orf47Q8N9M1 422 aaKnown RBP0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 SNX19Q92543 992 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 MAP4K1Q92918 833 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 TUBGCP5Q96RT8 1024 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 RTBDNQ9BSG5 229 aaPredicted RBP0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 RBM4Q9BWF3 364 aaKnown RBP0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 PITHD1Q9GZP4 211 aaPredicted RBP0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 MTG2Q9H4K7 406 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZNF696Q9H7X3 374 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 PLK2Q9NYY3 685 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 EVPLQ92817 2033 aa0.01□□□□□ -2.41
RNU6-540P-201ENST00000384622 A0A0U1RQF3 1178 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 KIF1CO43896 1103 aaKnown RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 OPHN1O60890 802 aa0□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZC3H11AO75152 810 aaKnown RBP eCLIP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 ZBTB48P10074 688 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 PRKCSHP14314 528 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 DRG2P55039 364 aaKnown RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 SOS1Q07889 1333 aaPredicted RBP0□□□□□ -2.41
RNU6-540P-201ENST00000384622 KIF5AQ12840 1032 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms