RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 TWF2Q6IBS0 349 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 SCARA5Q6ZMJ2 495 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 MMS22LQ6ZRQ5 1243 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 LIMS2Q7Z4I7 341 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 KRT222Q8N1A0 295 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 STK32AQ8WU08 396 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 ALG3Q92685 438 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 C18orf8Q96DM3 657 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 SDCBP2Q9H190 292 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 NXF3Q9H4D5 531 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 SMYD3Q9H7B4 428 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 UBN1Q9NPG3 1134 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 FEZ2Q9UHY8 353 aaPredicted RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 DMGDHQ9UI17 866 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 O00370 1275 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 PODXLO00592 558 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 ATMINO43313 823 aaPredicted RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 CFHP08603 1231 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 GBP1P32455 592 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 TAF6P49848 677 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 NDST1P52848 882 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 DRG2P55039 364 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 PAK2Q13177 524 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 CYP1B1Q16678 543 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 DNAJC24Q6P3W2 148 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 MRPL10Q7Z7H8 261 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 PASD1Q8IV76 773 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 CRYBG2Q8N1P7 616 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 SMG8Q8ND04 991 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 C1orf131Q8NDD1 294 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 SEC14L1Q92503 715 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 HEXIM2Q96MH2 286 aaKnown RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 ELOVL4Q9GZR5 314 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 RAB17Q9H0T7 212 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 CYLDQ9NQC7 956 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 EHD2Q9NZN4 543 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 PARP2Q9UGN5 583 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 ST3GAL5Q9UNP4 418 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 TRIP11Q15643 1979 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 TMEM110-MUSTN1A8MSY1 372 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 KPNA7A9QM74 516 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 FSCN2O14926 492 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 HEXIM1O94992 359 aaKnown RBP14.37□□□□□ -0.11
SEC13-203ENST00000383801 CCND3P30281 292 aaPredicted RBP14.37□□□□□ -0.11
SEC13-203ENST00000383801 GPD2P43304 727 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 COPS2P61201 443 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 PTGISQ16647 500 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 ARHGAP17Q68EM7 881 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 DCUN1D2Q6PH85 259 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 SLC13A5Q86YT5 568 aaPredicted RBP14.37□□□□□ -0.11
SEC13-203ENST00000383801 ZDHHC17Q8IUH5 632 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 KATNAL2Q8IYT4 538 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 C12orf50Q8NA57 414 aaPredicted RBP14.37□□□□□ -0.11
SEC13-203ENST00000383801 SLAIN1Q8ND83 568 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 RAET1EQ8TD07 263 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 AENQ8WTP8 325 aaKnown RBP14.37□□□□□ -0.11
SEC13-203ENST00000383801 CAVIN3Q969G5 261 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 FAM129AQ9BZQ8 928 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 FAM105AQ9NUU6 356 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 SMARCAL1Q9NZC9 954 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 PCYOX1Q9UHG3 505 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 SNX9Q9Y5X1 595 aa14.37□□□□□ -0.11
SEC13-203ENST00000383801 PHF2O75151 1096 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 CALCAP01258 141 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 CHRNA1P02708 482 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 PYGMP11217 842 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 FNTAP49354 379 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
SEC13-203ENST00000383801 ITGA7Q13683 1181 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 CASP8Q14790 479 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 POLNQ7Z5Q5 900 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 SPATA18Q8TC71 538 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
SEC13-203ENST00000383801 KRT35Q92764 455 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 MCRS1Q96EZ8 462 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 PPP1R10Q96QC0 940 aaKnown RBP14.36□□□□□ -0.11
SEC13-203ENST00000383801 FAM114A2Q9NRY5 505 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 DDX56Q9NY93 547 aaKnown RBP14.36□□□□□ -0.11
SEC13-203ENST00000383801 RASAL2Q9UJF2 1139 aa14.36□□□□□ -0.11
SEC13-203ENST00000383801 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
SEC13-203ENST00000383801 RAD51CO43502 376 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 MICAL2O94851 1124 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 SEC31AO94979 1220 aaKnown RBP14.35□□□□□ -0.11
SEC13-203ENST00000383801 GLI1P08151 1106 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 KRT3P12035 628 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 ITGA4P13612 1032 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 AKAP5P24588 427 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 RPL9P32969 192 aaKnown RBP14.35□□□□□ -0.11
SEC13-203ENST00000383801 RAP1GAPP47736 663 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 TRIM32Q13049 653 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 DENND1BQ6P3S1 775 aa14.35□□□□□ -0.11
SEC13-203ENST00000383801 KLHL7Q8IXQ5 586 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms