RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ZNF624Q9P2J8 865 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 ANO9A1A5B4 782 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 HMGB3O15347 200 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 TRAPPC3O43617 180 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KRT6AP02538 564 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KRT6BP04259 564 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 S100A9P06702 114 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 KRT6CP48668 564 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KRT76Q01546 638 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ENOSF1Q7L5Y1 443 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 NSUN6Q8TEA1 469 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 SH3GLB2Q9NR46 395 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RGS18Q9NS28 235 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MBD2Q9UBB5 411 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 AGAP1Q9UPQ3 857 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 AATKQ6ZMQ8 1374 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ZNF862O60290 1169 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 AGTP01019 485 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ERVK-10P10266 1014 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RARBP10826 455 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 NOS3P29474 1203 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 DSG3P32926 999 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KRT20P35900 424 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 NUMBP49757 651 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MROH9Q5TGP6 573 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CACHD1Q5VU97 1274 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 SLC7A14Q8TBB6 771 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 NSL1Q96IY1 281 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CCT8L2Q96SF2 557 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 LRRC1Q9BTT6 524 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 GJB4Q9NTQ9 266 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 FAM153AQ9UHL3 310 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 POLR1DQ9Y2S0 133 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 SH3GLB1Q9Y371 365 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 IPPQ9Y573 584 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CDY2AQ9Y6F7 541 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CDY1Q9Y6F8 540 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 NESP48681 1621 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ZBTB5O15062 677 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CNOT3O75175 753 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 POLBP06746 335 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CTSHP09668 335 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PHKG2P15735 406 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PDGFRAP16234 1089 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CCND1P24385 295 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 IL12RB1P42701 662 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 SERPINH1P50454 418 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 MMRN1Q13201 1228 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CAMK2GQ13555 558 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 CBFBQ13951 182 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MAPK11Q15759 364 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KYNUQ16719 465 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TAF8Q7Z7C8 310 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RNF149Q8NC42 400 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 B3GALNT2Q8NCR0 500 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TRPC4APQ8TEL6 797 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TMEM117Q9H0C3 514 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RNF146Q9NTX7 359 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 FBXO40Q9UH90 709 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TRMT6Q9UJA5 497 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 SNX8Q9Y5X2 465 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KIF24Q5T7B8 1368 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PFASO15067 1338 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 BBOX1O75936 387 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CLTBP09497 229 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 FCER1AP12319 257 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ITGA3P26006 1051 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TARSP26639 723 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 PIK3R1P27986 724 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 C1DQ13901 141 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 ARMC3Q5W041 872 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 SYDE1Q6ZW31 735 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 CACTIN-AS1Q8N1I8 211 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CAMKK1Q8N5S9 505 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PDCD10Q9BUL8 212 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PACSIN1Q9BY11 444 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 FAM49BQ9NUQ9 324 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TRPC4Q9UBN4 977 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 SNX9Q9Y5X1 595 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 IGF2BP3O00425 579 aaKnown RBP eCLIP6.1□□□□□ -1.43
RFX3-204ENST00000382004 ZNF189O75820 626 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 ENO2P09104 434 aaPredicted RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 NUP107P57740 925 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 GPSM2P81274 684 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PTK6Q13882 451 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MED15Q96RN5 788 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 PHACTR1Q9C0D0 580 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KCTD10Q9H3F6 313 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 LIMA1Q9UHB6 759 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 EDC4Q6P2E9 1401 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 NPHP3-ACAD11A0A0J9YXS1 232 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 FAM196BA6NMK8 535 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MFN2O95140 757 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 EIF2B2P49770 351 aaKnown RBP6.1□□□□□ -1.43
RFX3-204ENST00000382004 SMTNL2Q2TAL5 461 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KIRREL3Q8IZU9 778 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ATG16L2Q8NAA4 619 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RAET1EQ8TD07 263 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms