RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PPEF2O14830 753 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 TRAK2O60296 914 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 FAM189A1O60320 539 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 TBCAO75347 108 aaKnown RBP17.29■□□□□ 0.36
VCX3A-201ENST00000381089 RPP40O75818 363 aaKnown RBP17.29■□□□□ 0.36
VCX3A-201ENST00000381089 SEC24BO95487 1268 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 NFICP08651 508 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 CCDC192P0DO97 292 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 DDX6P26196 483 aaKnown RBP eCLIP17.29■□□□□ 0.36
VCX3A-201ENST00000381089 UBA7P41226 1012 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 TAF6P49848 677 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 TNK2Q07912 1038 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 BFSP1Q12934 665 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 CACNA2D4Q7Z3S7 1137 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 DCP1BQ8IZD4 617 aaKnown RBP17.29■□□□□ 0.36
VCX3A-201ENST00000381089 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 OR10T2Q8NGX3 314 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 KIF9Q9HAQ2 790 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 C2CD2Q9Y426 696 aa17.29■□□□□ 0.36
VCX3A-201ENST00000381089 CYB561D2O14569 222 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 GDF9O60383 454 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 ATF6P18850 670 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 ZNF131P52739 623 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 LIMK1P53667 647 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
VCX3A-201ENST00000381089 WDR44Q5JSH3 913 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 ADALQ6DHV7 355 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
VCX3A-201ENST00000381089 PYM1Q9BRP8 204 aaKnown RBP17.28■□□□□ 0.36
VCX3A-201ENST00000381089 GKN1Q9NS71 199 aa17.28■□□□□ 0.36
VCX3A-201ENST00000381089 KMT2BQ9UMN6 2715 aaPredicted RBP17.27■□□□□ 0.36
VCX3A-201ENST00000381089 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 AXIN1O15169 862 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 AKAP3O75969 853 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 RUNX3Q13761 415 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 GIPC2Q8TF65 315 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 ARRDC1-AS1Q9H2J1 176 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 C2orf42Q9NWW7 574 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 DPP3Q9NY33 737 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 ABI2Q9NYB9 513 aaPredicted RBP17.27■□□□□ 0.36
VCX3A-201ENST00000381089 PCDHB5Q9Y5E4 795 aa17.27■□□□□ 0.36
VCX3A-201ENST00000381089 TSC2P49815 1807 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 GREB1Q4ZG55 1949 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 SOBPA7XYQ1 873 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 EXTL3O43909 919 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 EPN2O95208 641 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 ZNF806P0C7X5 589 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 HAPLN1P10915 354 aaPredicted RBP17.26■□□□□ 0.35
VCX3A-201ENST00000381089 ACOT2P49753 483 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 GTF2BQ00403 316 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 TSPY1Q01534 308 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 POU5F1Q01860 360 aaKnown RBP17.26■□□□□ 0.35
VCX3A-201ENST00000381089 SV2CQ496J9 727 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 TMEM196Q5HYL7 178 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 CAMKK1Q8N5S9 505 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 MAB21L3Q8N8X9 362 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 MRPS31Q92665 395 aaKnown RBP17.26■□□□□ 0.35
VCX3A-201ENST00000381089 ZNF560Q96MR9 790 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 FAM83CQ9BQN1 747 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 CCSER1Q9C0I3 900 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 SMG9Q9H0W8 520 aaKnown RBP17.26■□□□□ 0.35
VCX3A-201ENST00000381089 AGO2Q9UKV8 859 aaKnown RBP17.26■□□□□ 0.35
VCX3A-201ENST00000381089 PCDHGA5Q9Y5G8 931 aa17.26■□□□□ 0.35
VCX3A-201ENST00000381089 SPAG17Q6Q759 2223 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 KIF26AQ9ULI4 1882 aaPredicted RBP17.25■□□□□ 0.35
VCX3A-201ENST00000381089 TRDMT1O14717 391 aaKnown RBP17.25■□□□□ 0.35
VCX3A-201ENST00000381089 BMP15O95972 392 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 CSH1P0DML2 217 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 CSH2P0DML3 217 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 DRD1P21728 446 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 PNPLA4P41247 253 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 NFE2Q16621 373 aaPredicted RBP17.25■□□□□ 0.35
VCX3A-201ENST00000381089 FBXO43Q4G163 708 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 WSCD1Q658N2 575 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 NT5DC4Q86YG4 428 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 EBF3Q9H4W6 596 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 TDP1Q9NUW8 608 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 UXTQ9UBK9 157 aaPredicted RBP17.25■□□□□ 0.35
VCX3A-201ENST00000381089 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 TCHHQ07283 1943 aa17.25■□□□□ 0.35
VCX3A-201ENST00000381089 ANK1P16157 1881 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 MAP1BP46821 2468 aaKnown RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 CHD8Q9HCK8 2581 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 KPNA7A9QM74 516 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 IL18RAPO95256 599 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 RAP1GAPP47736 663 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 PXNP49023 591 aaPredicted RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 NLRP12P59046 1061 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 POSTNQ15063 836 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 PDGFRLQ15198 375 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 SF3A2Q15428 464 aaKnown RBP17.24■□□□□ 0.35
VCX3A-201ENST00000381089 FSTL4Q6MZW2 842 aa17.24■□□□□ 0.35
VCX3A-201ENST00000381089 SLC39A4Q6P5W5 647 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms