RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 RMI1Q9H9A7 625 aa18.19■□□□□ 0.5
PDX1-201ENST00000381033 GBA2Q9HCG7 927 aaPredicted RBP18.19■□□□□ 0.5
PDX1-201ENST00000381033 VTA1Q9NP79 307 aa18.19■□□□□ 0.5
PDX1-201ENST00000381033 DNAJC17Q9NVM6 304 aaKnown RBP18.19■□□□□ 0.5
PDX1-201ENST00000381033 CWC15Q9P013 229 aaKnown RBP18.19■□□□□ 0.5
PDX1-201ENST00000381033 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
PDX1-201ENST00000381033 FAM187AA6NFU0 413 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 GOLGA8SH3BPF8 625 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 PIK3R2O00459 728 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 IRAK1P51617 712 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 AP3M2P53677 418 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 ILDR2Q71H61 639 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 PRMT7Q9NVM4 692 aaPredicted RBP18.18■□□□□ 0.5
PDX1-201ENST00000381033 HES2Q9Y543 173 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 LACTBP83111 547 aaPredicted RBP18.18■□□□□ 0.5
PDX1-201ENST00000381033 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
PDX1-201ENST00000381033 GRIK4Q16099 956 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 FAM182AQ5T1J6 154 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 ZFYVE27Q5T4F4 411 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 TRIM72Q6ZMU5 477 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 CD302Q8IX05 232 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDX1-201ENST00000381033 TRIM11Q96F44 468 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 ATP6V1G3Q96LB4 118 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 TINF2Q9BSI4 451 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 CAPS2Q9BXY5 557 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 TMBIM4Q9HC24 238 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 PARVAQ9NVD7 372 aa18.18■□□□□ 0.5
PDX1-201ENST00000381033 TCRBV5S1A1TA0A578 114 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 ASAP2O43150 1006 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 PPFIA4O75335 1185 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 MMP3P08254 477 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
PDX1-201ENST00000381033 MAGEA8P43361 318 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 GNGT1P63211 74 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 KRT17Q04695 432 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 ACVR2BQ13705 512 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 PPP1R7Q15435 360 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 PTPN20Q4JDL3 420 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 LEKR1Q6ZMV7 388 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 THOC1Q96FV9 657 aaKnown RBP18.17■□□□□ 0.5
PDX1-201ENST00000381033 LRRC19Q9H756 370 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 GRIN2DO15399 1336 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 TMEM191CA6NGB0 347 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 SMIM23A6NLE4 172 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 TSPAN1O60635 241 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 HSPA6P17066 643 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 RAD23BP54727 409 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 GRB14Q14449 540 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 HIC1Q14526 733 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 CCDC25Q86WR0 208 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 EMC1Q8N766 993 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 OR6J1Q8NGC5 347 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 RRAGCQ9HB90 399 aa18.17■□□□□ 0.5
PDX1-201ENST00000381033 MRPL47Q9HD33 250 aaKnown RBP18.17■□□□□ 0.5
PDX1-201ENST00000381033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDX1-201ENST00000381033 RBM47A0AV96 593 aaKnown RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 DYNC1LI2O43237 492 aaPredicted RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 STRNO43815 780 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 SETSIPP0DME0 302 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 SLC1A1P43005 524 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 CDR1P51861 262 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 PPP2R5EQ16537 467 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 ZNF667Q5HYK9 610 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 SPRYD7Q5W111 196 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 JOSD2Q8TAC2 188 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 VCPIP1Q96JH7 1222 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 ELOVL4Q9GZR5 314 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 FLRT1Q9NZU1 646 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 CPSF2Q9P2I0 782 aaKnown RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 MORF4L1Q9UBU8 362 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 RASAL2Q9UJF2 1139 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 SCN4AP35499 1836 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 ZEB2O60315 1214 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 RFC1P35251 1148 aaPredicted RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 MAGEA9P43362 315 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 KLF1Q13351 362 aaPredicted RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 SLC29A2Q14542 456 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 DUSP28Q4G0W2 176 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 ERICH1Q86X53 443 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 RHOT1Q8IXI2 618 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 TMEM35BQ8NCS4 154 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 CCDC114Q96M63 670 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 CPXM1Q96SM3 734 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 AGAP1Q9UPQ3 857 aa18.16■□□□□ 0.5
PDX1-201ENST00000381033 RRP15Q9Y3B9 282 aaKnown RBP18.16■□□□□ 0.5
PDX1-201ENST00000381033 ANKRD65E5RJM6 399 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 PPEF2O14830 753 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 SHOX2O60902 331 aaPredicted RBP18.15■□□□□ 0.5
PDX1-201ENST00000381033 MYZAPP0CAP1 466 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 NR1D1P20393 614 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 FOXD4Q12950 439 aaPredicted RBP18.15■□□□□ 0.5
PDX1-201ENST00000381033 SURF1Q15526 300 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 SMTNL2Q2TAL5 461 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 DNAJC24Q6P3W2 148 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 GLIS1Q8NBF1 620 aa18.15■□□□□ 0.5
PDX1-201ENST00000381033 SLC4A11Q8NBS3 891 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms