RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 ZRSR2Q15696 482 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 SPATA18Q8TC71 538 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 SAE1Q9UBE0 346 aaPredicted RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 BAIAP2L1Q9UHR4 511 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 GNAT1P11488 350 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 ARL4CP56559 192 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 NFIL3Q16649 462 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 GOLGA7BQ2TAP0 167 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 MFSD7Q6UXD7 560 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 FBXO41Q8TF61 875 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 GPR20Q99678 358 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 ACO2Q99798 780 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 CDT1Q9H211 546 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 RGS20O76081 388 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 CPP00450 1065 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 FLT3P36888 993 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 IL9RQ01113 521 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
CDX2-201ENST00000381020 FYB2Q5VWT5 728 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 LRRC31Q6UY01 552 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
CDX2-201ENST00000381020 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 NACA2Q9H009 215 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDX2-201ENST00000381020 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 MAPK13O15264 365 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 CHN1P15882 459 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 FAXCQ5TGI0 409 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
CDX2-201ENST00000381020 GPATCH11Q8N954 259 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 DNAAF3Q8N9W5 541 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 CCDC110Q8TBZ0 833 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 ARIH2O95376 493 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 GCLCP48506 637 aaPredicted RBP13.17□□□□□ -0.3
CDX2-201ENST00000381020 FNTAP49354 379 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
CDX2-201ENST00000381020 BEX3Q00994 111 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 TAP1Q03518 808 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 FAM71DQ8N9W8 422 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
CDX2-201ENST00000381020 MAFBQ9Y5Q3 323 aaPredicted RBP13.17□□□□□ -0.3
CDX2-201ENST00000381020 MT-ND3P03897 115 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 APRTP07741 180 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 NDST1P52848 882 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 RTP1P59025 263 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 HIF1AQ16665 826 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 NOTUMQ6P988 496 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 TMC3Q7Z5M5 1100 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 WDR35Q9P2L0 1181 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 BTNL10A8MVZ5 291 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 KCNN4O15554 427 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 CAV1Q03135 178 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 C4orf33Q8N1A6 199 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 NTPCRQ9BSD7 190 aaKnown RBP13.16□□□□□ -0.3
CDX2-201ENST00000381020 RAB6BQ9NRW1 208 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 ROR1Q01973 937 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 LRIG3Q6UXM1 1119 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 PWWP2AQ96N64 755 aa13.16□□□□□ -0.3
CDX2-201ENST00000381020 KLF6Q99612 283 aaPredicted RBP13.16□□□□□ -0.3
CDX2-201ENST00000381020 PRMT1Q99873 361 aaKnown RBP13.16□□□□□ -0.3
CDX2-201ENST00000381020 ALG13Q9NP73 1137 aaKnown RBP13.16□□□□□ -0.3
CDX2-201ENST00000381020 NCANO14594 1321 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 NDC80O14777 642 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 SUN1O94901 812 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 ZSCAN5DPP0CG00 497 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 CHRNB2P17787 502 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 HSPA9P38646 679 aaKnown RBP13.15□□□□□ -0.3
CDX2-201ENST00000381020 MAMLD1Q13495 774 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 ACVR2BQ13705 512 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 SIK2Q9H0K1 926 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 CDC42EP4Q9H3Q1 356 aaKnown RBP13.15□□□□□ -0.3
CDX2-201ENST00000381020 ABHD16BQ9H3Z7 469 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 PSD3Q9NYI0 1048 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 MYH11P35749 1972 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 EP400Q96L91 3159 aa13.15□□□□□ -0.3
CDX2-201ENST00000381020 MAGEA4P43358 317 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms