RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 RNF146Q9NTX7 359 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 DNAJC11Q9NVH1 559 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 TRNAU1APQ9NX07 287 aaKnown RBP11.24□□□□□ -0.61
CLCN4-202ENST00000380833 O00370 1275 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
CLCN4-202ENST00000380833 TP53BP2Q13625 1128 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 HLFQ16534 295 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 TOR1AIP2Q8NFQ8 470 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 RIN2Q8WYP3 895 aaPredicted RBP11.24□□□□□ -0.61
CLCN4-202ENST00000380833 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
CLCN4-202ENST00000380833 TSPOAP1O95153 1857 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 F8W810 466 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 USP1O94782 785 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 RGS7P49802 495 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ST8SIA6P61647 398 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 BTBD8Q5XKL5 378 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 P2RX5Q93086 422 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 BORCS5Q969J3 196 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 DHX35Q9H5Z1 703 aaKnown RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 NPHS2Q9NP85 383 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 TJP2Q9UDY2 1190 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 TMEM94Q12767 1356 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 FKBP6O75344 327 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 TTLL4Q14679 1199 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 IYDQ6PHW0 289 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 RASSF6Q6ZTQ3 369 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MARK2Q7KZI7 788 aaKnown RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 SPATA2LQ8IUW3 424 aaPredicted RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ARL8AQ96BM9 186 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 POLR3FQ9H1D9 316 aaPredicted RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 TMEM206Q9H813 350 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ENDOD1O94919 500 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 IFNA16P05015 189 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 PHKA2P46019 1235 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MCL1Q07820 350 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MTMR2Q13614 643 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 C6orf183Q5T699 404 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 FUKQ8N0W3 1084 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 SIPA1Q96FS4 1042 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MAGED4Q96JG8 741 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 C11orf70Q9BRQ4 267 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ALG13Q9NP73 1137 aaKnown RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 SLC12A4Q9UP95 1085 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 PCDHB6Q9Y5E3 794 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 FESP07332 822 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ITGAXP20702 1163 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 PBLDP30039 288 aaPredicted RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 OR1G1P47890 313 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MTM1Q13496 603 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 SGO1Q5FBB7 561 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 HMBOX1Q6NT76 420 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 MNTQ99583 582 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 OSBPL8Q9BZF1 889 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 EXOSC4Q9NPD3 245 aaKnown RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 BBOX1O75936 387 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 EIF4A3P38919 411 aaKnown RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 TAF1BQ53T94 588 aaPredicted RBP11.23□□□□□ -0.61
CLCN4-202ENST00000380833 UNC5CLQ8IV45 518 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 DCUN1D1Q96GG9 259 aa11.23□□□□□ -0.61
CLCN4-202ENST00000380833 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 KIF28PB7ZC32 967 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 NOS1APO75052 506 aaPredicted RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 CELF2O95319 508 aaKnown RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 TAC1P20366 129 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 COG2Q14746 738 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ZC2HC1CQ53FD0 456 aaPredicted RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 SETD1BQ9UPS6 1966 aaKnown RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 CHL1O00533 1208 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 KLHL2O95198 593 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 GAP43P17677 238 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ALOX12P18054 663 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 CHKAP35790 457 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 MAPK9P45984 424 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 GALK1P51570 392 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 STX5Q13190 355 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ZNF235Q14590 738 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 SMU1Q2TAY7 513 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ASPSCR1Q9BZE9 553 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 IGFLR1Q9H665 355 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 CUEDC1Q9NWM3 386 aaPredicted RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ALBP02768 609 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 ELF3P78545 371 aaPredicted RBP11.22□□□□□ -0.61
CLCN4-202ENST00000380833 AKIRIN2Q53H80 203 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 RSPH1Q8WYR4 309 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
CLCN4-202ENST00000380833 MRPL47Q9HD33 250 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms