RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 LHX5Q9H2C1 402 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 CHCHD3Q9NX63 227 aaKnown RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 HPCAL4Q9UM19 191 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 KCNK3O14649 394 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 BUB1BO60566 1050 aaPredicted RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 FAM163BP0C2L3 166 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 SKIP12755 728 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 MAGEA8P43361 318 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 VEGFBP49765 207 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 NOMO3P69849 1222 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 TAP1Q03518 808 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 INCA1Q0VD86 236 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 CCNI2Q6ZMN8 369 aaPredicted RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 ARRDC4Q8NCT1 418 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 ZNF564Q8TBZ8 553 aaPredicted RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 ARHGEF26Q96DR7 871 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 LRRC1Q9BTT6 524 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 EIF2AQ9BY44 585 aaKnown RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 WNT8AQ9H1J5 351 aa14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 HMX1Q9NP08 348 aaPredicted RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 RBM12Q9NTZ6 932 aaKnown RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 NXF1Q9UBU9 619 aaKnown RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 CNOT8Q9UFF9 292 aaKnown RBP14.68□□□□□ -0.06
TNFSF13-203ENST00000380535 MEFVO15553 781 aaPredicted RBP14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 RECQL4O94761 1208 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 SLC1A1P43005 524 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 PTGISQ16647 500 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 GLE1Q53GS7 698 aaKnown RBP14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 FAM26DQ5JW98 314 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 FAM228AQ86W67 206 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 ACTRT1Q8TDG2 376 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 TMEM40Q8WWA1 233 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 FAM84AQ96KN4 292 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 NUP85Q9BW27 656 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 PLVAPQ9BX97 442 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 MIS12Q9H081 205 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 ACP6Q9NPH0 428 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 SLC38A7Q9NVC3 462 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 STRIP2Q9ULQ0 834 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 TTC7AQ9ULT0 858 aaPredicted RBP14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 SH3BP5O60239 455 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 PSMC1P62191 440 aaKnown RBP14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 MGAT3Q09327 533 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 ITGA7Q13683 1181 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 PPP2R5EQ16537 467 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 UBXN11Q5T124 520 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 MON1BQ7L1V2 547 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 CARD9Q9H257 536 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 BARX2Q9UMQ3 279 aaPredicted RBP14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 COG5Q9UP83 839 aa14.67□□□□□ -0.06
TNFSF13-203ENST00000380535 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 CILPO75339 1184 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 ZMYND10O75800 440 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 MYBL2P10244 700 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 VDRP11473 427 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 CD58P19256 250 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 ACTN2P35609 894 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 ACLYP53396 1101 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 MFSD4BQ5TF39 518 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 HDAC7Q8WUI4 952 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 ELMO3Q96BJ8 720 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 ADAM22Q9P0K1 906 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 TMEM59LQ9UK28 342 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 NOD1Q9Y239 953 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 NOC2LQ9Y3T9 749 aaKnown RBP14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 IPPQ9Y573 584 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 SYF2O95926 243 aaKnown RBP14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 WEE2P0C1S8 567 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 HSPA6P17066 643 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 NAA35Q5VZE5 725 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 UNC93AQ86WB7 457 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 RASGEF1CQ8N431 466 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 CYFIP2Q96F07 1278 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 TMEM176AQ96HP8 235 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 NXF3Q9H4D5 531 aaKnown RBP14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 UBN1Q9NPG3 1134 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 PARVAQ9NVD7 372 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 PARP2Q9UGN5 583 aa14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 DMGDHQ9UI17 866 aaKnown RBP14.66□□□□□ -0.06
TNFSF13-203ENST00000380535 CCDC188H7C350 402 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 CREB3O43889 395 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 RNF40O75150 1001 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 INHAP05111 366 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 GRK4P32298 578 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 SNX16P57768 344 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 SV2CQ496J9 727 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 SCARA5Q6ZMJ2 495 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 GSPT2Q8IYD1 628 aaKnown RBP14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 ZNF784Q8NCA9 323 aaPredicted RBP14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 AENQ8WTP8 325 aaKnown RBP14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 WDR35Q9P2L0 1181 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 POLIQ9UNA4 740 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 ST3GAL5Q9UNP4 418 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 GIT1Q9Y2X7 761 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 ALG6Q9Y672 507 aa14.65□□□□□ -0.06
TNFSF13-203ENST00000380535 SMIM28A0A1B0GU29 152 aa14.64□□□□□ -0.07
TNFSF13-203ENST00000380535 PGRMC1O00264 195 aaKnown RBP14.64□□□□□ -0.07
TNFSF13-203ENST00000380535 MMP8P22894 467 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms